Cluster: A91.bin_21_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: A91.bin_21
- CGC Family ID: CGCFAM_06379
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A91_contig_551 | A91_contig_551_257 | 241293 | 242177 | + | 2.A.7.3.47 |
| pfam | A91_contig_551 | A91_contig_551_258 | 242191 | 244023 | + | Radical_SAM | Radical_SAM_N2 |
| pfam | A91_contig_551 | A91_contig_551_259 | 244016 | 244678 | + | DUF2344 |
| CAZyme | A91_contig_551 | A91_contig_551_260 | 244922 | 246763 | + | CBM48 | GH13_9 |
| pfam | A91_contig_551 | A91_contig_551_261 | 246791 | 248002 | + | NTP_transferase | Hexapep_GlmU |
| pfam | A91_contig_551 | A91_contig_551_262 | 247999 | 249105 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | A91_contig_551 | A91_contig_551_263 | 249138 | 250562 | + | GT5 |
| CAZyme | A91_contig_551 | A91_contig_551_264 | 250563 | 252980 | + | GT35 |
| TC | A91_contig_551 | A91_contig_551_265 | 253339 | 254721 | + | 1.A.26.1.2 |
| pfam | A91_contig_551 | A91_contig_551_266 | 254763 | 255254 | - | Hexapep | Hexapep | Hexapep_2 | Hexapep_2 |
| pfam | A91_contig_551 | A91_contig_551_267 | 255268 | 255498 | - | Transgly_assoc |
| TC | A91_contig_551 | A91_contig_551_268 | 255495 | 256343 | - | 1.A.23.2.1 |
Gene ID: A91_contig_551_257
Type: TC
Location: 241293 - 242177 (+)
Type: TC
Location: 241293 - 242177 (+)
Gene ID: A91_contig_551_258
Type: pfam
Location: 242191 - 244023 (+)
Type: pfam
Location: 242191 - 244023 (+)
Gene ID: A91_contig_551_259
Type: pfam
Location: 244016 - 244678 (+)
Type: pfam
Location: 244016 - 244678 (+)
Gene ID: A91_contig_551_260
Type: CAZyme
Location: 244922 - 246763 (+)
Type: CAZyme
Location: 244922 - 246763 (+)
Gene ID: A91_contig_551_261
Type: pfam
Location: 246791 - 248002 (+)
Type: pfam
Location: 246791 - 248002 (+)
Gene ID: A91_contig_551_262
Type: pfam
Location: 247999 - 249105 (+)
Type: pfam
Location: 247999 - 249105 (+)
Gene ID: A91_contig_551_263
Type: CAZyme
Location: 249138 - 250562 (+)
Type: CAZyme
Location: 249138 - 250562 (+)
Gene ID: A91_contig_551_264
Type: CAZyme
Location: 250563 - 252980 (+)
Type: CAZyme
Location: 250563 - 252980 (+)
Gene ID: A91_contig_551_265
Type: TC
Location: 253339 - 254721 (+)
Type: TC
Location: 253339 - 254721 (+)
Gene ID: A91_contig_551_266
Type: pfam
Location: 254763 - 255254 (-)
Type: pfam
Location: 254763 - 255254 (-)
Gene ID: A91_contig_551_267
Type: pfam
Location: 255268 - 255498 (-)
Type: pfam
Location: 255268 - 255498 (-)
Gene ID: A91_contig_551_268
Type: TC
Location: 255495 - 256343 (-)
Type: TC
Location: 255495 - 256343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas cirricatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.