Cluster: A91.bin_21_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: A91.bin_21
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A91_contig_485 | A91_contig_485_267 | 278318 | 279052 | + | 2.A.15.1.7 |
| TC | A91_contig_485 | A91_contig_485_268 | 279059 | 279847 | + | 2.A.15.2.2 |
| pfam | A91_contig_485 | A91_contig_485_269 | 279844 | 280680 | + | LicD |
| CAZyme | A91_contig_485 | A91_contig_485_270 | 280692 | 281819 | + | GT4 |
| CAZyme | A91_contig_485 | A91_contig_485_271 | 281797 | 282705 | + | GT2 |
| pfam | A91_contig_485 | A91_contig_485_272 | 282728 | 283504 | + | LicD |
| CAZyme | A91_contig_485 | A91_contig_485_273 | 283518 | 284726 | + | GT4 |
| CAZyme | A91_contig_485 | A91_contig_485_274 | 284730 | 285425 | + | GT32 |
| NULL(UNKNOWN) | A91_contig_485 | A91_contig_485_275 | 285422 | 286759 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A91_contig_485 | A91_contig_485_276 | 286765 | 287790 | + | GT2 |
| CAZyme | A91_contig_485 | A91_contig_485_277 | 287814 | 288815 | + | GT2 |
| CAZyme | A91_contig_485 | A91_contig_485_278 | 288828 | 289844 | + | GT2 |
| CAZyme | A91_contig_485 | A91_contig_485_279 | 289859 | 290767 | + | GT2 |
Gene ID: A91_contig_485_267
Type: TC
Location: 278318 - 279052 (+)
Type: TC
Location: 278318 - 279052 (+)
Gene ID: A91_contig_485_268
Type: TC
Location: 279059 - 279847 (+)
Type: TC
Location: 279059 - 279847 (+)
Gene ID: A91_contig_485_269
Type: pfam
Location: 279844 - 280680 (+)
Type: pfam
Location: 279844 - 280680 (+)
Gene ID: A91_contig_485_270
Type: CAZyme
Location: 280692 - 281819 (+)
Type: CAZyme
Location: 280692 - 281819 (+)
Gene ID: A91_contig_485_271
Type: CAZyme
Location: 281797 - 282705 (+)
Type: CAZyme
Location: 281797 - 282705 (+)
Gene ID: A91_contig_485_272
Type: pfam
Location: 282728 - 283504 (+)
Type: pfam
Location: 282728 - 283504 (+)
Gene ID: A91_contig_485_273
Type: CAZyme
Location: 283518 - 284726 (+)
Type: CAZyme
Location: 283518 - 284726 (+)
Gene ID: A91_contig_485_274
Type: CAZyme
Location: 284730 - 285425 (+)
Type: CAZyme
Location: 284730 - 285425 (+)
Gene ID: A91_contig_485_275
Type:
Location: 285422 - 286759 (+)
Type:
Location: 285422 - 286759 (+)
Gene ID: A91_contig_485_276
Type: CAZyme
Location: 286765 - 287790 (+)
Type: CAZyme
Location: 286765 - 287790 (+)
Gene ID: A91_contig_485_277
Type: CAZyme
Location: 287814 - 288815 (+)
Type: CAZyme
Location: 287814 - 288815 (+)
Gene ID: A91_contig_485_278
Type: CAZyme
Location: 288828 - 289844 (+)
Type: CAZyme
Location: 288828 - 289844 (+)
Gene ID: A91_contig_485_279
Type: CAZyme
Location: 289859 - 290767 (+)
Type: CAZyme
Location: 289859 - 290767 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas cirricatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A91_contig_485_269 | vegetarian > omnivore | 1.01169 | 0.02243 |
| A91_contig_485_270 | vegetarian > vegan | 1.53222 | 0.02923 |