dbCAN Logo

Cluster: A89.bin_8_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A89_contig_869 A89_contig_869_331 377688 379370 + 2.A.81.1.2
NULL(UNKNOWN) A89_contig_869 A89_contig_869_332 379429 379551 + NULL(UNKNOWN)
[View Structural Homologs]
TC A89_contig_869 A89_contig_869_333 379748 380515 + 8.A.3.2.3
pfam A89_contig_869 A89_contig_869_334 380521 381408 + ParBc | HTH_ParB | ParB_dimer
pfam A89_contig_869 A89_contig_869_335 381435 382199 + DUF5683
CAZyme A89_contig_869 A89_contig_869_336 382231 384366 + GH23
Gene ID: A89_contig_869_331
Type: TC
Location: 377688 - 379370 (+)
Gene ID: A89_contig_869_332
Type:
Location: 379429 - 379551 (+)
Gene ID: A89_contig_869_333
Type: TC
Location: 379748 - 380515 (+)
Gene ID: A89_contig_869_334
Type: pfam
Location: 380521 - 381408 (+)
Gene ID: A89_contig_869_335
Type: pfam
Location: 381435 - 382199 (+)
Gene ID: A89_contig_869_336
Type: CAZyme
Location: 382231 - 384366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A89_contig_869_332 vegan > omnivore 2.45603 0.01033
A89_contig_869_333 vegan > omnivore 1.74071 0.01033
A89_contig_869_334 vegan > omnivore 1.81498 0.01033
A89_contig_869_335 vegan > omnivore 2.34005 0.01033
A89_contig_869_336 vegan > omnivore 1.35126 0.01033

🧭 Explore Read Mapping of CGC

← Back to Cluster List