Cluster: A89.bin_8_CGC19
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: A89.bin_8
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A89_contig_873 | A89_contig_873_171 | 203390 | 204604 | - | GT4 |
| pfam | A89_contig_873 | A89_contig_873_172 | 204616 | 205791 | - | Epimerase_2 |
| pfam | A89_contig_873 | A89_contig_873_173 | 205797 | 206996 | - | Epimerase | Polysacc_synt_C |
| TC | A89_contig_873 | A89_contig_873_174 | 206993 | 208042 | - | 9.B.18.2.1 |
| pfam | A89_contig_873 | A89_contig_873_175 | 208059 | 208472 | - | DUF6016 | DUF6016 |
| CAZyme | A89_contig_873 | A89_contig_873_176 | 208587 | 209549 | - | GT2 |
| CAZyme | A89_contig_873 | A89_contig_873_177 | 209557 | 210249 | - | CE4 |
| CAZyme | A89_contig_873 | A89_contig_873_178 | 210251 | 211369 | - | GT4 |
Gene ID: A89_contig_873_171
Type: CAZyme
Location: 203390 - 204604 (-)
Type: CAZyme
Location: 203390 - 204604 (-)
Gene ID: A89_contig_873_172
Type: pfam
Location: 204616 - 205791 (-)
Type: pfam
Location: 204616 - 205791 (-)
Gene ID: A89_contig_873_173
Type: pfam
Location: 205797 - 206996 (-)
Type: pfam
Location: 205797 - 206996 (-)
Gene ID: A89_contig_873_174
Type: TC
Location: 206993 - 208042 (-)
Type: TC
Location: 206993 - 208042 (-)
Gene ID: A89_contig_873_175
Type: pfam
Location: 208059 - 208472 (-)
Type: pfam
Location: 208059 - 208472 (-)
Gene ID: A89_contig_873_176
Type: CAZyme
Location: 208587 - 209549 (-)
Type: CAZyme
Location: 208587 - 209549 (-)
Gene ID: A89_contig_873_177
Type: CAZyme
Location: 209557 - 210249 (-)
Type: CAZyme
Location: 209557 - 210249 (-)
Gene ID: A89_contig_873_178
Type: CAZyme
Location: 210251 - 211369 (-)
Type: CAZyme
Location: 210251 - 211369 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma sp000437795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.