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Cluster: A89.bin_8_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A89_contig_1538 A89_contig_1538_251 289526 290875 + 2.A.25.1.9
pfam A89_contig_1538 A89_contig_1538_252 291020 291775 - LEM-3_GIY-YIG
TF A89_contig_1538 A89_contig_1538_253 291828 292607 - KilA-N
TC A89_contig_1538 A89_contig_1538_254 292951 294813 + 3.A.1.120.6
TC A89_contig_1538 A89_contig_1538_255 294820 296040 + 2.A.1.35.1
pfam A89_contig_1538 A89_contig_1538_256 296027 296548 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4
CAZyme A89_contig_1538 A89_contig_1538_257 296557 297729 - GT2
Gene ID: A89_contig_1538_251
Type: TC
Location: 289526 - 290875 (+)
Gene ID: A89_contig_1538_252
Type: pfam
Location: 291020 - 291775 (-)
Gene ID: A89_contig_1538_253
Type: TF
Location: 291828 - 292607 (-)
Gene ID: A89_contig_1538_254
Type: TC
Location: 292951 - 294813 (+)
Gene ID: A89_contig_1538_255
Type: TC
Location: 294820 - 296040 (+)
Gene ID: A89_contig_1538_256
Type: pfam
Location: 296027 - 296548 (-)
Gene ID: A89_contig_1538_257
Type: CAZyme
Location: 296557 - 297729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A89_contig_1538_251 vegan > omnivore 1.35091 0.01033
A89_contig_1538_255 vegan > omnivore 1.38125 0.01033
A89_contig_1538_256 vegan > omnivore 1.90033 0.01033

🧭 Explore Read Mapping of CGC

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