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Cluster: A83.bin_2_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A83_contig_5_corr_1_s0_np12 A83_contig_5_corr_1_s0_np12_133 152078 153481 + 8.A.3.1.2
TC A83_contig_5_corr_1_s0_np12 A83_contig_5_corr_1_s0_np12_134 153465 154910 + 8.A.3.2.3
TC A83_contig_5_corr_1_s0_np12 A83_contig_5_corr_1_s0_np12_135 154907 156805 + 9.B.18.2.1
TC A83_contig_5_corr_1_s0_np12 A83_contig_5_corr_1_s0_np12_136 156778 157665 + 9.B.18.1.1
CAZyme A83_contig_5_corr_1_s0_np12 A83_contig_5_corr_1_s0_np12_137 157716 158180 + GT4
Gene ID: A83_contig_5_corr_1_s0_np12_133
Type: TC
Location: 152078 - 153481 (+)
Gene ID: A83_contig_5_corr_1_s0_np12_134
Type: TC
Location: 153465 - 154910 (+)
Gene ID: A83_contig_5_corr_1_s0_np12_135
Type: TC
Location: 154907 - 156805 (+)
Gene ID: A83_contig_5_corr_1_s0_np12_136
Type: TC
Location: 156778 - 157665 (+)
Gene ID: A83_contig_5_corr_1_s0_np12_137
Type: CAZyme
Location: 157716 - 158180 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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