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Cluster: A83.bin_2_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A83_contig_2576 A83_contig_2576_22 16761 17858 + CE4
CAZyme A83_contig_2576 A83_contig_2576_23 18100 19986 + CBM48 | GH13_9
NULL(UNKNOWN) A83_contig_2576 A83_contig_2576_24 20092 20304 + NULL(UNKNOWN)
[View Structural Homologs]
TC A83_contig_2576 A83_contig_2576_25 20480 21694 + 9.B.10.1.1
Gene ID: A83_contig_2576_22
Type: CAZyme
Location: 16761 - 17858 (+)
Gene ID: A83_contig_2576_23
Type: CAZyme
Location: 18100 - 19986 (+)
Gene ID: A83_contig_2576_24
Type:
Location: 20092 - 20304 (+)
Gene ID: A83_contig_2576_25
Type: TC
Location: 20480 - 21694 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A83_contig_2576_22 vegan > omnivore 1.29895 0.03983

🧭 Explore Read Mapping of CGC

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