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Cluster: A83.bin_2_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A83_contig_1021 A83_contig_1021_572 641383 642393 - 3.A.1.2.18
TC A83_contig_1021 A83_contig_1021_573 642396 643925 - 3.A.1.2.13
pfam A83_contig_1021 A83_contig_1021_574 644157 645179 - ADH_zinc_N | ADH_N | ADH_zinc_N_2
pfam A83_contig_1021 A83_contig_1021_575 645261 645893 - Lipase_GDSL | Lipase_GDSL_2
CAZyme A83_contig_1021 A83_contig_1021_576 646073 647119 - GH179
STP A83_contig_1021 A83_contig_1021_577 647209 648168 - Peripla_BP_1
TC A83_contig_1021 A83_contig_1021_578 648224 649708 - 3.A.1.2.3
TC A83_contig_1021 A83_contig_1021_579 649724 650680 - 3.A.1.2.19
NULL(UNKNOWN) A83_contig_1021 A83_contig_1021_580 650699 651655 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A83_contig_1021 A83_contig_1021_581 651712 652419 - CE14
Gene ID: A83_contig_1021_572
Type: TC
Location: 641383 - 642393 (-)
Gene ID: A83_contig_1021_573
Type: TC
Location: 642396 - 643925 (-)
Gene ID: A83_contig_1021_574
Type: pfam
Location: 644157 - 645179 (-)
Gene ID: A83_contig_1021_575
Type: pfam
Location: 645261 - 645893 (-)
Gene ID: A83_contig_1021_576
Type: CAZyme
Location: 646073 - 647119 (-)
Gene ID: A83_contig_1021_577
Type: STP
Location: 647209 - 648168 (-)
Gene ID: A83_contig_1021_578
Type: TC
Location: 648224 - 649708 (-)
Gene ID: A83_contig_1021_579
Type: TC
Location: 649724 - 650680 (-)
Gene ID: A83_contig_1021_580
Type:
Location: 650699 - 651655 (-)
Gene ID: A83_contig_1021_581
Type: CAZyme
Location: 651712 - 652419 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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