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Cluster: A83.bin_2_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A83_contig_1021 A83_contig_1021_493 555981 559112 - GH38
CAZyme A83_contig_1021 A83_contig_1021_494 559191 561995 - GH38
TC A83_contig_1021 A83_contig_1021_495 562048 562863 - 3.A.1.1.41
TC A83_contig_1021 A83_contig_1021_496 562867 563736 - 3.A.1.1.25
STP A83_contig_1021 A83_contig_1021_497 563880 565229 - SBP_bac_1
TF A83_contig_1021 A83_contig_1021_498 565508 566443 + HTH_AraC | HTH_AraC
CAZyme A83_contig_1021 A83_contig_1021_499 566553 567833 + GH125
Gene ID: A83_contig_1021_493
Type: CAZyme
Location: 555981 - 559112 (-)
Gene ID: A83_contig_1021_494
Type: CAZyme
Location: 559191 - 561995 (-)
Gene ID: A83_contig_1021_495
Type: TC
Location: 562048 - 562863 (-)
Gene ID: A83_contig_1021_496
Type: TC
Location: 562867 - 563736 (-)
Gene ID: A83_contig_1021_497
Type: STP
Location: 563880 - 565229 (-)
Gene ID: A83_contig_1021_498
Type: TF
Location: 565508 - 566443 (+)
Gene ID: A83_contig_1021_499
Type: CAZyme
Location: 566553 - 567833 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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