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Cluster: A83.bin_2_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A83_contig_1021 A83_contig_1021_161 199745 200515 - 3.A.1.3.6
TC A83_contig_1021 A83_contig_1021_162 200527 201174 - 3.A.1.3.15
TC A83_contig_1021 A83_contig_1021_163 201260 202129 - 3.A.1.3.5
CAZyme A83_contig_1021 A83_contig_1021_164 202275 204383 - CBM34 | GH13_39
pfam A83_contig_1021 A83_contig_1021_165 204519 205034 - Macro
pfam A83_contig_1021 A83_contig_1021_166 205126 205941 - N_methyl
TC A83_contig_1021 A83_contig_1021_167 206343 208178 - 3.A.16.1.2
Gene ID: A83_contig_1021_161
Type: TC
Location: 199745 - 200515 (-)
Gene ID: A83_contig_1021_162
Type: TC
Location: 200527 - 201174 (-)
Gene ID: A83_contig_1021_163
Type: TC
Location: 201260 - 202129 (-)
Gene ID: A83_contig_1021_164
Type: CAZyme
Location: 202275 - 204383 (-)
Gene ID: A83_contig_1021_165
Type: pfam
Location: 204519 - 205034 (-)
Gene ID: A83_contig_1021_166
Type: pfam
Location: 205126 - 205941 (-)
Gene ID: A83_contig_1021_167
Type: TC
Location: 206343 - 208178 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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