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Cluster: A83.bin_2_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A83_contig_1021 A83_contig_1021_81 95113 97380 + GT35
TC A83_contig_1021 A83_contig_1021_82 97381 99078 - 3.A.1.1.9
TC A83_contig_1021 A83_contig_1021_83 99068 100771 - 8.A.59.2.1
TF A83_contig_1021 A83_contig_1021_84 100755 102284 - HTH_AraC | HTH_AraC
TC A83_contig_1021 A83_contig_1021_85 102385 103221 - 3.A.1.1.45
TC A83_contig_1021 A83_contig_1021_86 103221 104075 - 3.A.1.1.45
TC A83_contig_1021 A83_contig_1021_87 104194 105468 - 3.A.1.1.45
pfam A83_contig_1021 A83_contig_1021_88 105928 106959 - DUF308 | DUF308 | DUF308
TC A83_contig_1021 A83_contig_1021_89 107058 108389 - 2.A.79.1.3
Gene ID: A83_contig_1021_81
Type: CAZyme
Location: 95113 - 97380 (+)
Gene ID: A83_contig_1021_82
Type: TC
Location: 97381 - 99078 (-)
Gene ID: A83_contig_1021_83
Type: TC
Location: 99068 - 100771 (-)
Gene ID: A83_contig_1021_84
Type: TF
Location: 100755 - 102284 (-)
Gene ID: A83_contig_1021_85
Type: TC
Location: 102385 - 103221 (-)
Gene ID: A83_contig_1021_86
Type: TC
Location: 103221 - 104075 (-)
Gene ID: A83_contig_1021_87
Type: TC
Location: 104194 - 105468 (-)
Gene ID: A83_contig_1021_88
Type: pfam
Location: 105928 - 106959 (-)
Gene ID: A83_contig_1021_89
Type: TC
Location: 107058 - 108389 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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