Cluster: A83.bin_2_CGC18
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: A83.bin_2
- CGC Family ID: CGCFAM_00446
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A83_contig_470 | A83_contig_470_352 | 370229 | 370996 | + | 3.A.1.17.8 |
| pfam | A83_contig_470 | A83_contig_470_353 | 370989 | 371783 | + | BPD_transp_1 |
| CAZyme | A83_contig_470 | A83_contig_470_354 | 371806 | 373152 | - | GH29 |
| TC | A83_contig_470 | A83_contig_470_355 | 373183 | 374010 | - | 3.A.1.1.25 |
| TC | A83_contig_470 | A83_contig_470_356 | 374022 | 374903 | - | 3.A.1.1.18 |
| TC | A83_contig_470 | A83_contig_470_357 | 375029 | 376375 | - | 3.A.1.1.18 |
| TC | A83_contig_470 | A83_contig_470_358 | 376609 | 378393 | + | 8.A.59.2.1 |
| TF | A83_contig_470 | A83_contig_470_359 | 378418 | 379596 | + | HTH_AraC | HTH_AraC |
| CAZyme | A83_contig_470 | A83_contig_470_360 | 379693 | 381855 | - | GH112 |
| TF | A83_contig_470 | A83_contig_470_361 | 382037 | 382870 | + | HTH_AraC | HTH_AraC |
| CAZyme | A83_contig_470 | A83_contig_470_362 | 382858 | 385107 | - | GH95 |
| NULL(UNKNOWN) | A83_contig_470 | A83_contig_470_363 | 385172 | 385411 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A83_contig_470 | A83_contig_470_364 | 385537 | 387417 | - | 3.A.1.11.7 |
| TC | A83_contig_470 | A83_contig_470_365 | 387414 | 388229 | - | 3.A.1.11.8 |
| TC | A83_contig_470 | A83_contig_470_366 | 388219 | 389292 | - | 3.A.1.11.8 |
Gene ID: A83_contig_470_352
Type: TC
Location: 370229 - 370996 (+)
Type: TC
Location: 370229 - 370996 (+)
Gene ID: A83_contig_470_353
Type: pfam
Location: 370989 - 371783 (+)
Type: pfam
Location: 370989 - 371783 (+)
Gene ID: A83_contig_470_354
Type: CAZyme
Location: 371806 - 373152 (-)
Type: CAZyme
Location: 371806 - 373152 (-)
Gene ID: A83_contig_470_355
Type: TC
Location: 373183 - 374010 (-)
Type: TC
Location: 373183 - 374010 (-)
Gene ID: A83_contig_470_356
Type: TC
Location: 374022 - 374903 (-)
Type: TC
Location: 374022 - 374903 (-)
Gene ID: A83_contig_470_357
Type: TC
Location: 375029 - 376375 (-)
Type: TC
Location: 375029 - 376375 (-)
Gene ID: A83_contig_470_358
Type: TC
Location: 376609 - 378393 (+)
Type: TC
Location: 376609 - 378393 (+)
Gene ID: A83_contig_470_359
Type: TF
Location: 378418 - 379596 (+)
Type: TF
Location: 378418 - 379596 (+)
Gene ID: A83_contig_470_360
Type: CAZyme
Location: 379693 - 381855 (-)
Type: CAZyme
Location: 379693 - 381855 (-)
Gene ID: A83_contig_470_361
Type: TF
Location: 382037 - 382870 (+)
Type: TF
Location: 382037 - 382870 (+)
Gene ID: A83_contig_470_362
Type: CAZyme
Location: 382858 - 385107 (-)
Type: CAZyme
Location: 382858 - 385107 (-)
Gene ID: A83_contig_470_363
Type:
Location: 385172 - 385411 (-)
Type:
Location: 385172 - 385411 (-)
Gene ID: A83_contig_470_364
Type: TC
Location: 385537 - 387417 (-)
Type: TC
Location: 385537 - 387417 (-)
Gene ID: A83_contig_470_365
Type: TC
Location: 387414 - 388229 (-)
Type: TC
Location: 387414 - 388229 (-)
Gene ID: A83_contig_470_366
Type: TC
Location: 388219 - 389292 (-)
Type: TC
Location: 388219 - 389292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A obeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A83_contig_470_357 | vegan > omnivore | 1.03603 | 0.03983 |
| A83_contig_470_365 | vegan > omnivore | 1.05842 | 0.03983 |