dbCAN HGM

Cluster: A83.bin_2_CGC14

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	A83_contig_1570	A83_contig_1570_57	66374	68140	+	8.A.59.2.1
TF	A83_contig_1570	A83_contig_1570_58	68137	69654	+	HTH_AraC \| HTH_AraC
CAZyme	A83_contig_1570	A83_contig_1570_59	69753	71762	+	GH151
TC	A83_contig_1570	A83_contig_1570_60	71786	73093	+	3.A.1.1.40
TC	A83_contig_1570	A83_contig_1570_61	73169	74065	+	3.A.1.1.20
TC	A83_contig_1570	A83_contig_1570_62	74078	74911	+	3.A.1.1.47
TC	A83_contig_1570	A83_contig_1570_63	74981	76204	-	2.A.23.1.6

Gene ID: A83_contig_1570_57
Type: TC
Location: 66374 - 68140 (+)

Gene ID: A83_contig_1570_58
Type: TF
Location: 68137 - 69654 (+)

Gene ID: A83_contig_1570_59
Type: CAZyme
Location: 69753 - 71762 (+)

Gene ID: A83_contig_1570_60
Type: TC
Location: 71786 - 73093 (+)

Gene ID: A83_contig_1570_61
Type: TC
Location: 73169 - 74065 (+)

Gene ID: A83_contig_1570_62
Type: TC
Location: 74078 - 74911 (+)

Gene ID: A83_contig_1570_63
Type: TC
Location: 74981 - 76204 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
A83_contig_1570_57	vegan > omnivore	2.12809	0.03983
A83_contig_1570_58	vegan > omnivore	2.27690	0.03983
A83_contig_1570_59	vegan > omnivore	1.80321	0.03983
A83_contig_1570_60	vegan > omnivore	1.93813	0.03983
A83_contig_1570_61	vegan > omnivore	1.66082	0.03983
A83_contig_1570_62	vegan > omnivore	1.30329	0.03983

Gene ID	Condition Pair	log2FC	FDR P-value
A83_contig_1570_63	nonIBD > UC	1.68684	0.01846