Cluster: A83.bin_2_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A83.bin_2
- CGC Family ID: CGCFAM_03145
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A83_contig_1570 | A83_contig_1570_46 | 51875 | 53707 | + | 9.B.33.1.1 |
| TF | A83_contig_1570 | A83_contig_1570_47 | 53707 | 55320 | + | HTH_AraC | HTH_AraC |
| STP | A83_contig_1570 | A83_contig_1570_48 | 55548 | 56843 | + | SBP_bac_1 |
| TC | A83_contig_1570 | A83_contig_1570_49 | 56943 | 57827 | + | 3.A.1.1.20 |
| TC | A83_contig_1570 | A83_contig_1570_50 | 57824 | 58663 | + | 3.A.1.1.41 |
| CAZyme | A83_contig_1570 | A83_contig_1570_51 | 58782 | 60173 | + | GH32 |
| TC | A83_contig_1570 | A83_contig_1570_52 | 60340 | 61563 | - | 2.A.23.1.6 |
Gene ID: A83_contig_1570_46
Type: TC
Location: 51875 - 53707 (+)
Type: TC
Location: 51875 - 53707 (+)
Gene ID: A83_contig_1570_47
Type: TF
Location: 53707 - 55320 (+)
Type: TF
Location: 53707 - 55320 (+)
Gene ID: A83_contig_1570_48
Type: STP
Location: 55548 - 56843 (+)
Type: STP
Location: 55548 - 56843 (+)
Gene ID: A83_contig_1570_49
Type: TC
Location: 56943 - 57827 (+)
Type: TC
Location: 56943 - 57827 (+)
Gene ID: A83_contig_1570_50
Type: TC
Location: 57824 - 58663 (+)
Type: TC
Location: 57824 - 58663 (+)
Gene ID: A83_contig_1570_51
Type: CAZyme
Location: 58782 - 60173 (+)
Type: CAZyme
Location: 58782 - 60173 (+)
Gene ID: A83_contig_1570_52
Type: TC
Location: 60340 - 61563 (-)
Type: TC
Location: 60340 - 61563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A obeum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A83_contig_1570_46 | vegan > omnivore | 1.05171 | 0.03983 |
| A83_contig_1570_47 | vegan > omnivore | 1.20638 | 0.03983 |
| A83_contig_1570_48 | vegan > omnivore | 1.84393 | 0.02665 |
| A83_contig_1570_49 | vegan > omnivore | 1.21476 | 0.03983 |
| A83_contig_1570_50 | vegan > omnivore | 1.32519 | 0.03983 |
| A83_contig_1570_51 | vegan > omnivore | 1.15233 | 0.03983 |