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Cluster: A83.bin_2_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A83_contig_1012 A83_contig_1012_576 623669 627004 - 2.A.56.1.1
pfam A83_contig_1012 A83_contig_1012_577 627005 627505 - DctQ
STP A83_contig_1012 A83_contig_1012_578 627837 629282 + GGDEF | dCache_1
CAZyme A83_contig_1012 A83_contig_1012_579 629371 631044 + GH13_31
TC A83_contig_1012 A83_contig_1012_580 631568 632923 - 2.A.66.1.7
TC A83_contig_1012 A83_contig_1012_581 632946 634286 - 2.A.66.1.37
Gene ID: A83_contig_1012_576
Type: TC
Location: 623669 - 627004 (-)
Gene ID: A83_contig_1012_577
Type: pfam
Location: 627005 - 627505 (-)
Gene ID: A83_contig_1012_578
Type: STP
Location: 627837 - 629282 (+)
Gene ID: A83_contig_1012_579
Type: CAZyme
Location: 629371 - 631044 (+)
Gene ID: A83_contig_1012_580
Type: TC
Location: 631568 - 632923 (-)
Gene ID: A83_contig_1012_581
Type: TC
Location: 632946 - 634286 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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