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Cluster: A83.bin_2_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A83_contig_1012 A83_contig_1012_542 586792 588279 - GH32
pfam A83_contig_1012 A83_contig_1012_543 588659 589069 - ATP-synt_DE | ATP-synt_DE_N
TC A83_contig_1012 A83_contig_1012_544 589082 590473 - 3.A.2.1.5
TC A83_contig_1012 A83_contig_1012_545 590479 591369 - 3.A.2.1.5
TC A83_contig_1012 A83_contig_1012_546 591441 592955 - 3.A.2.1.5
pfam A83_contig_1012 A83_contig_1012_547 592961 593464 - OSCP
pfam A83_contig_1012 A83_contig_1012_548 593445 593945 - ATP-synt_B
TC A83_contig_1012 A83_contig_1012_549 594001 594225 - 3.A.2.1.2
TC A83_contig_1012 A83_contig_1012_550 594298 594921 - 3.A.2.1.5
Gene ID: A83_contig_1012_542
Type: CAZyme
Location: 586792 - 588279 (-)
Gene ID: A83_contig_1012_543
Type: pfam
Location: 588659 - 589069 (-)
Gene ID: A83_contig_1012_544
Type: TC
Location: 589082 - 590473 (-)
Gene ID: A83_contig_1012_545
Type: TC
Location: 590479 - 591369 (-)
Gene ID: A83_contig_1012_546
Type: TC
Location: 591441 - 592955 (-)
Gene ID: A83_contig_1012_547
Type: pfam
Location: 592961 - 593464 (-)
Gene ID: A83_contig_1012_548
Type: pfam
Location: 593445 - 593945 (-)
Gene ID: A83_contig_1012_549
Type: TC
Location: 594001 - 594225 (-)
Gene ID: A83_contig_1012_550
Type: TC
Location: 594298 - 594921 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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