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Cluster: A83.CMAG_1_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A83_contig_276 A83_contig_276_2130 2302856 2303917 - GH18
STP A83_contig_276 A83_contig_276_2131 2303935 2305158 - HD
pfam A83_contig_276 A83_contig_276_2132 2305163 2305879 - RadC | HHH_2
TC A83_contig_276 A83_contig_276_2133 2306113 2307471 + 2.A.22.5.3
pfam A83_contig_276 A83_contig_276_2134 2307532 2308083 - DUF3793
TF A83_contig_276 A83_contig_276_2135 2308798 2309637 + HTH_AraC
TC A83_contig_276 A83_contig_276_2136 2309827 2310900 + 3.A.1.2.3
TC A83_contig_276 A83_contig_276_2137 2310916 2312421 + 3.A.1.2.3
TC A83_contig_276 A83_contig_276_2138 2312433 2313500 + 3.A.1.2.3
Gene ID: A83_contig_276_2130
Type: CAZyme
Location: 2302856 - 2303917 (-)
Gene ID: A83_contig_276_2131
Type: STP
Location: 2303935 - 2305158 (-)
Gene ID: A83_contig_276_2132
Type: pfam
Location: 2305163 - 2305879 (-)
Gene ID: A83_contig_276_2133
Type: TC
Location: 2306113 - 2307471 (+)
Gene ID: A83_contig_276_2134
Type: pfam
Location: 2307532 - 2308083 (-)
Gene ID: A83_contig_276_2135
Type: TF
Location: 2308798 - 2309637 (+)
Gene ID: A83_contig_276_2136
Type: TC
Location: 2309827 - 2310900 (+)
Gene ID: A83_contig_276_2137
Type: TC
Location: 2310916 - 2312421 (+)
Gene ID: A83_contig_276_2138
Type: TC
Location: 2312433 - 2313500 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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