Cluster: A83.CMAG_1_CGC27
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: A83.CMAG_1
- CGC Family ID: CGCFAM_01938
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A83_contig_276 | A83_contig_276_1932 | 2090653 | 2092644 | + | GH18 |
| CAZyme | A83_contig_276 | A83_contig_276_1933 | 2092712 | 2094679 | - | GH163 |
| pfam | A83_contig_276 | A83_contig_276_1934 | 2094729 | 2096597 | - | Radical_SAM | Radical_SAM_N | DUF3362 |
| TC | A83_contig_276 | A83_contig_276_1935 | 2097019 | 2098425 | + | 1.A.26.1.3 |
| STP | A83_contig_276 | A83_contig_276_1936 | 2098465 | 2099127 | - | AraC_binding |
| CAZyme | A83_contig_276 | A83_contig_276_1937 | 2099235 | 2101910 | + | GH95 |
| TC | A83_contig_276 | A83_contig_276_1938 | 2101972 | 2103381 | - | 2.A.2.3.1 |
| TC | A83_contig_276 | A83_contig_276_1939 | 2103800 | 2105434 | - | 8.A.7.1.1 |
| STP | A83_contig_276 | A83_contig_276_1940 | 2105436 | 2105696 | - | PTS-HPr |
| TC | A83_contig_276 | A83_contig_276_1941 | 2105720 | 2107678 | - | 4.A.2.1.20 |
Gene ID: A83_contig_276_1932
Type: CAZyme
Location: 2090653 - 2092644 (+)
Type: CAZyme
Location: 2090653 - 2092644 (+)
Gene ID: A83_contig_276_1933
Type: CAZyme
Location: 2092712 - 2094679 (-)
Type: CAZyme
Location: 2092712 - 2094679 (-)
Gene ID: A83_contig_276_1934
Type: pfam
Location: 2094729 - 2096597 (-)
Type: pfam
Location: 2094729 - 2096597 (-)
Gene ID: A83_contig_276_1935
Type: TC
Location: 2097019 - 2098425 (+)
Type: TC
Location: 2097019 - 2098425 (+)
Gene ID: A83_contig_276_1936
Type: STP
Location: 2098465 - 2099127 (-)
Type: STP
Location: 2098465 - 2099127 (-)
Gene ID: A83_contig_276_1937
Type: CAZyme
Location: 2099235 - 2101910 (+)
Type: CAZyme
Location: 2099235 - 2101910 (+)
Gene ID: A83_contig_276_1938
Type: TC
Location: 2101972 - 2103381 (-)
Type: TC
Location: 2101972 - 2103381 (-)
Gene ID: A83_contig_276_1939
Type: TC
Location: 2103800 - 2105434 (-)
Type: TC
Location: 2103800 - 2105434 (-)
Gene ID: A83_contig_276_1940
Type: STP
Location: 2105436 - 2105696 (-)
Type: STP
Location: 2105436 - 2105696 (-)
Gene ID: A83_contig_276_1941
Type: TC
Location: 2105720 - 2107678 (-)
Type: TC
Location: 2105720 - 2107678 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.