Cluster: A83.CMAG_1_CGC26
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: A83.CMAG_1
- CGC Family ID: CGCFAM_06816
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A83_contig_276 | A83_contig_276_1852 | 2002884 | 2003885 | - | 9.A.11.1.1 |
| CAZyme | A83_contig_276 | A83_contig_276_1853 | 2003936 | 2005591 | - | GH13_31 |
| pfam | A83_contig_276 | A83_contig_276_1854 | 2005647 | 2008121 | - | MFS_2 |
| pfam | A83_contig_276 | A83_contig_276_1855 | 2008494 | 2008976 | + | Y1_Tnp |
| TC | A83_contig_276 | A83_contig_276_1856 | 2009125 | 2010471 | - | 2.A.66.1.28 |
| pfam | A83_contig_276 | A83_contig_276_1857 | 2010487 | 2011344 | - | DUF3737 |
| pfam | A83_contig_276 | A83_contig_276_1858 | 2011573 | 2013006 | - | GatB_Yqey | GatB_N |
| TC | A83_contig_276 | A83_contig_276_1859 | 2013019 | 2014485 | - | 3.A.9.1.1 |
| pfam | A83_contig_276 | A83_contig_276_1860 | 2014496 | 2014786 | - | GatC |
| pfam | A83_contig_276 | A83_contig_276_1861 | 2014918 | 2016672 | - | tRNA-synt_2 | tRNA_anti-codon | GAD |
| CAZyme | A83_contig_276 | A83_contig_276_1862 | 2016879 | 2018729 | - | GH13_39 |
| CAZyme | A83_contig_276 | A83_contig_276_1863 | 2018805 | 2021282 | - | GT35 |
Gene ID: A83_contig_276_1852
Type: TC
Location: 2002884 - 2003885 (-)
Type: TC
Location: 2002884 - 2003885 (-)
Gene ID: A83_contig_276_1853
Type: CAZyme
Location: 2003936 - 2005591 (-)
Type: CAZyme
Location: 2003936 - 2005591 (-)
Gene ID: A83_contig_276_1854
Type: pfam
Location: 2005647 - 2008121 (-)
Type: pfam
Location: 2005647 - 2008121 (-)
Gene ID: A83_contig_276_1855
Type: pfam
Location: 2008494 - 2008976 (+)
Type: pfam
Location: 2008494 - 2008976 (+)
Gene ID: A83_contig_276_1856
Type: TC
Location: 2009125 - 2010471 (-)
Type: TC
Location: 2009125 - 2010471 (-)
Gene ID: A83_contig_276_1857
Type: pfam
Location: 2010487 - 2011344 (-)
Type: pfam
Location: 2010487 - 2011344 (-)
Gene ID: A83_contig_276_1858
Type: pfam
Location: 2011573 - 2013006 (-)
Type: pfam
Location: 2011573 - 2013006 (-)
Gene ID: A83_contig_276_1859
Type: TC
Location: 2013019 - 2014485 (-)
Type: TC
Location: 2013019 - 2014485 (-)
Gene ID: A83_contig_276_1860
Type: pfam
Location: 2014496 - 2014786 (-)
Type: pfam
Location: 2014496 - 2014786 (-)
Gene ID: A83_contig_276_1861
Type: pfam
Location: 2014918 - 2016672 (-)
Type: pfam
Location: 2014918 - 2016672 (-)
Gene ID: A83_contig_276_1862
Type: CAZyme
Location: 2016879 - 2018729 (-)
Type: CAZyme
Location: 2016879 - 2018729 (-)
Gene ID: A83_contig_276_1863
Type: CAZyme
Location: 2018805 - 2021282 (-)
Type: CAZyme
Location: 2018805 - 2021282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.