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Cluster: A83.CMAG_1_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A83_contig_276 A83_contig_276_1219 1339770 1341539 + GH35
NULL(UNKNOWN) A83_contig_276 A83_contig_276_1220 1341565 1341753 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A83_contig_276 A83_contig_276_1221 1341768 1342754 + Alk_phosphatase | Alk_phosphatase | Metalloenzyme
TC A83_contig_276 A83_contig_276_1222 1342785 1344569 + 3.A.1.111.2
TC A83_contig_276 A83_contig_276_1223 1344572 1346404 + 3.A.1.111.2
NULL(UNKNOWN) A83_contig_276 A83_contig_276_1224 1346401 1347336 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A83_contig_276 A83_contig_276_1225 1347340 1348461 + GT4
Gene ID: A83_contig_276_1219
Type: CAZyme
Location: 1339770 - 1341539 (+)
Gene ID: A83_contig_276_1220
Type:
Location: 1341565 - 1341753 (+)
Gene ID: A83_contig_276_1221
Type: pfam
Location: 1341768 - 1342754 (+)
Gene ID: A83_contig_276_1222
Type: TC
Location: 1342785 - 1344569 (+)
Gene ID: A83_contig_276_1223
Type: TC
Location: 1344572 - 1346404 (+)
Gene ID: A83_contig_276_1224
Type:
Location: 1346401 - 1347336 (+)
Gene ID: A83_contig_276_1225
Type: CAZyme
Location: 1347340 - 1348461 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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