Cluster: A83.CMAG_1_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A83.CMAG_1
- CGC Family ID: CGCFAM_01132
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A83_contig_276 | A83_contig_276_787 | 858730 | 859743 | - | 2.A.119.1.3 |
| TF | A83_contig_276 | A83_contig_276_788 | 859832 | 860140 | - | HTH_5 |
| pfam | A83_contig_276 | A83_contig_276_789 | 860268 | 860645 | - | TnpV |
| CAZyme | A83_contig_276 | A83_contig_276_790 | 861165 | 862643 | - | GH29 |
| STP | A83_contig_276 | A83_contig_276_791 | 862756 | 864162 | - | Pribosyltran |
| TC | A83_contig_276 | A83_contig_276_792 | 864396 | 865832 | + | 2.A.2.1.1 |
Gene ID: A83_contig_276_787
Type: TC
Location: 858730 - 859743 (-)
Type: TC
Location: 858730 - 859743 (-)
Gene ID: A83_contig_276_788
Type: TF
Location: 859832 - 860140 (-)
Type: TF
Location: 859832 - 860140 (-)
Gene ID: A83_contig_276_789
Type: pfam
Location: 860268 - 860645 (-)
Type: pfam
Location: 860268 - 860645 (-)
Gene ID: A83_contig_276_790
Type: CAZyme
Location: 861165 - 862643 (-)
Type: CAZyme
Location: 861165 - 862643 (-)
Gene ID: A83_contig_276_791
Type: STP
Location: 862756 - 864162 (-)
Type: STP
Location: 862756 - 864162 (-)
Gene ID: A83_contig_276_792
Type: TC
Location: 864396 - 865832 (+)
Type: TC
Location: 864396 - 865832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A83_contig_276_787 | vegetarian > vegan | 1.45760 | 0.01560 |
| A83_contig_276_788 | omnivore > vegan | 1.82713 | 0.03418 |
| A83_contig_276_789 | omnivore > vegan | 1.14853 | 0.03764 |