Cluster: A72.CMAG_1_CGC7
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: A72.CMAG_1
- CGC Family ID: CGCFAM_04468
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A72_contig_1503 | A72_contig_1503_166 | 217504 | 218814 | - | CE4 |
| pfam | A72_contig_1503 | A72_contig_1503_167 | 218991 | 220022 | + | F_bP_aldolase |
| pfam | A72_contig_1503 | A72_contig_1503_168 | 220575 | 221861 | + | Adenylsucc_synt |
| TC | A72_contig_1503 | A72_contig_1503_169 | 222002 | 222934 | + | 1.A.43.3.4 |
| pfam | A72_contig_1503 | A72_contig_1503_170 | 222934 | 223308 | + | CRCB |
| TC | A72_contig_1503 | A72_contig_1503_171 | 223897 | 225333 | + | 3.A.1.4.10 |
| TC | A72_contig_1503 | A72_contig_1503_172 | 225337 | 226320 | + | 3.A.1.4.2 |
| TC | A72_contig_1503 | A72_contig_1503_173 | 226313 | 227320 | + | 3.A.1.4.2 |
| TC | A72_contig_1503 | A72_contig_1503_174 | 227313 | 228128 | + | 3.A.1.4.6 |
| pfam | A72_contig_1503 | A72_contig_1503_175 | 228271 | 229536 | + | ANF_receptor | Peripla_BP_5 | Peripla_BP_6 |
| TF | A72_contig_1503 | A72_contig_1503_176 | 229614 | 230642 | - | LacI |
| CAZyme | A72_contig_1503 | A72_contig_1503_177 | 230949 | 232469 | + | GH13_18 |
| TC | A72_contig_1503 | A72_contig_1503_178 | 232526 | 234139 | + | 2.A.1.2.93 |
| TC | A72_contig_1503 | A72_contig_1503_179 | 234396 | 235124 | + | 3.A.1.4.10 |
Gene ID: A72_contig_1503_166
Type: CAZyme
Location: 217504 - 218814 (-)
Type: CAZyme
Location: 217504 - 218814 (-)
Gene ID: A72_contig_1503_167
Type: pfam
Location: 218991 - 220022 (+)
Type: pfam
Location: 218991 - 220022 (+)
Gene ID: A72_contig_1503_168
Type: pfam
Location: 220575 - 221861 (+)
Type: pfam
Location: 220575 - 221861 (+)
Gene ID: A72_contig_1503_169
Type: TC
Location: 222002 - 222934 (+)
Type: TC
Location: 222002 - 222934 (+)
Gene ID: A72_contig_1503_170
Type: pfam
Location: 222934 - 223308 (+)
Type: pfam
Location: 222934 - 223308 (+)
Gene ID: A72_contig_1503_171
Type: TC
Location: 223897 - 225333 (+)
Type: TC
Location: 223897 - 225333 (+)
Gene ID: A72_contig_1503_172
Type: TC
Location: 225337 - 226320 (+)
Type: TC
Location: 225337 - 226320 (+)
Gene ID: A72_contig_1503_173
Type: TC
Location: 226313 - 227320 (+)
Type: TC
Location: 226313 - 227320 (+)
Gene ID: A72_contig_1503_174
Type: TC
Location: 227313 - 228128 (+)
Type: TC
Location: 227313 - 228128 (+)
Gene ID: A72_contig_1503_175
Type: pfam
Location: 228271 - 229536 (+)
Type: pfam
Location: 228271 - 229536 (+)
Gene ID: A72_contig_1503_176
Type: TF
Location: 229614 - 230642 (-)
Type: TF
Location: 229614 - 230642 (-)
Gene ID: A72_contig_1503_177
Type: CAZyme
Location: 230949 - 232469 (+)
Type: CAZyme
Location: 230949 - 232469 (+)
Gene ID: A72_contig_1503_178
Type: TC
Location: 232526 - 234139 (+)
Type: TC
Location: 232526 - 234139 (+)
Gene ID: A72_contig_1503_179
Type: TC
Location: 234396 - 235124 (+)
Type: TC
Location: 234396 - 235124 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.