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Cluster: A72.CMAG_1_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A72_contig_1503 A72_contig_1503_26 42048 45038 - 3.A.3.2.21
pfam A72_contig_1503 A72_contig_1503_27 45353 46348 + SpoU_methylase | SpoU_sub_bind
pfam A72_contig_1503 A72_contig_1503_28 46497 47945 - Kdo | DUF4032
TC A72_contig_1503 A72_contig_1503_29 48153 49286 - 3.A.1.1.45
TC A72_contig_1503 A72_contig_1503_30 49710 50732 + 1.A.1.17.2
TC A72_contig_1503 A72_contig_1503_31 50802 52919 + 9.B.106.2.2
pfam A72_contig_1503 A72_contig_1503_32 53299 54336 + Thioredoxin_4
CAZyme A72_contig_1503 A72_contig_1503_33 55004 56551 + GH23
Gene ID: A72_contig_1503_26
Type: TC
Location: 42048 - 45038 (-)
Gene ID: A72_contig_1503_27
Type: pfam
Location: 45353 - 46348 (+)
Gene ID: A72_contig_1503_28
Type: pfam
Location: 46497 - 47945 (-)
Gene ID: A72_contig_1503_29
Type: TC
Location: 48153 - 49286 (-)
Gene ID: A72_contig_1503_30
Type: TC
Location: 49710 - 50732 (+)
Gene ID: A72_contig_1503_31
Type: TC
Location: 50802 - 52919 (+)
Gene ID: A72_contig_1503_32
Type: pfam
Location: 53299 - 54336 (+)
Gene ID: A72_contig_1503_33
Type: CAZyme
Location: 55004 - 56551 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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