Cluster: A72.CMAG_1_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A72.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A72_contig_1503 | A72_contig_1503_997 | 1210174 | 1211085 | + | 3.A.1.15.8 |
| TC | A72_contig_1503 | A72_contig_1503_998 | 1211082 | 1211927 | + | 3.A.1.15.3 |
| pfam | A72_contig_1503 | A72_contig_1503_999 | 1212038 | 1212541 | - | YgbB |
| pfam | A72_contig_1503 | A72_contig_1503_1000 | 1212538 | 1213134 | - | CarD_TRCF_RID | CarD_C |
| CAZyme | A72_contig_1503 | A72_contig_1503_1001 | 1213173 | 1215524 | + | GH13_9 |
Gene ID: A72_contig_1503_997
Type: TC
Location: 1210174 - 1211085 (+)
Type: TC
Location: 1210174 - 1211085 (+)
Gene ID: A72_contig_1503_998
Type: TC
Location: 1211082 - 1211927 (+)
Type: TC
Location: 1211082 - 1211927 (+)
Gene ID: A72_contig_1503_999
Type: pfam
Location: 1212038 - 1212541 (-)
Type: pfam
Location: 1212038 - 1212541 (-)
Gene ID: A72_contig_1503_1000
Type: pfam
Location: 1212538 - 1213134 (-)
Type: pfam
Location: 1212538 - 1213134 (-)
Gene ID: A72_contig_1503_1001
Type: CAZyme
Location: 1213173 - 1215524 (+)
Type: CAZyme
Location: 1213173 - 1215524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.