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Cluster: A72.CMAG_1_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A72_contig_1503 A72_contig_1503_512 650806 652149 - 3.A.1.1.44
CAZyme A72_contig_1503 A72_contig_1503_513 652395 654482 - GH42
TC A72_contig_1503 A72_contig_1503_514 654524 655504 - 3.A.1.1.48
TC A72_contig_1503 A72_contig_1503_515 655524 656492 - 3.A.1.1.48
TF A72_contig_1503 A72_contig_1503_516 656779 657777 + LacI
CAZyme A72_contig_1503 A72_contig_1503_517 658399 659424 - GT2
pfam A72_contig_1503 A72_contig_1503_518 659555 661144 + AI-2E_transport
CAZyme A72_contig_1503 A72_contig_1503_519 661144 662430 + GT2
TC A72_contig_1503 A72_contig_1503_520 662641 663513 + 3.A.1.147.9
Gene ID: A72_contig_1503_512
Type: TC
Location: 650806 - 652149 (-)
Gene ID: A72_contig_1503_513
Type: CAZyme
Location: 652395 - 654482 (-)
Gene ID: A72_contig_1503_514
Type: TC
Location: 654524 - 655504 (-)
Gene ID: A72_contig_1503_515
Type: TC
Location: 655524 - 656492 (-)
Gene ID: A72_contig_1503_516
Type: TF
Location: 656779 - 657777 (+)
Gene ID: A72_contig_1503_517
Type: CAZyme
Location: 658399 - 659424 (-)
Gene ID: A72_contig_1503_518
Type: pfam
Location: 659555 - 661144 (+)
Gene ID: A72_contig_1503_519
Type: CAZyme
Location: 661144 - 662430 (+)
Gene ID: A72_contig_1503_520
Type: TC
Location: 662641 - 663513 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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