Cluster: A72.CMAG_1_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A72.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A72_contig_1503 | A72_contig_1503_306 | 404998 | 408456 | + | GH2 |
| pfam | A72_contig_1503 | A72_contig_1503_307 | 408736 | 409905 | - | Exo_endo_phos |
| pfam | A72_contig_1503 | A72_contig_1503_308 | 410368 | 411273 | - | Cation_efflux |
| TC | A72_contig_1503 | A72_contig_1503_309 | 411401 | 413044 | + | 9.B.76.1.1 |
| pfam | A72_contig_1503 | A72_contig_1503_310 | 414188 | 415825 | - | tRNA-synt_1e | DALR_2 | CysS_C |
| TC | A72_contig_1503 | A72_contig_1503_311 | 415874 | 418075 | - | 3.A.1.121.3 |
Gene ID: A72_contig_1503_306
Type: CAZyme
Location: 404998 - 408456 (+)
Type: CAZyme
Location: 404998 - 408456 (+)
Gene ID: A72_contig_1503_307
Type: pfam
Location: 408736 - 409905 (-)
Type: pfam
Location: 408736 - 409905 (-)
Gene ID: A72_contig_1503_308
Type: pfam
Location: 410368 - 411273 (-)
Type: pfam
Location: 410368 - 411273 (-)
Gene ID: A72_contig_1503_309
Type: TC
Location: 411401 - 413044 (+)
Type: TC
Location: 411401 - 413044 (+)
Gene ID: A72_contig_1503_310
Type: pfam
Location: 414188 - 415825 (-)
Type: pfam
Location: 414188 - 415825 (-)
Gene ID: A72_contig_1503_311
Type: TC
Location: 415874 - 418075 (-)
Type: TC
Location: 415874 - 418075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.