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Cluster: A58.bin_3_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A58_scaffold_86 A58_scaffold_86_76 76698 77957 + 4.A.3.2.6
TF A58_scaffold_86 A58_scaffold_86_77 78043 79986 + HTH_11
TC A58_scaffold_86 A58_scaffold_86_78 80003 80299 + 4.A.3.2.6
pfam A58_scaffold_86 A58_scaffold_86_79 80315 81052 + PNP_UDP_1
NULL(UNKNOWN) A58_scaffold_86 A58_scaffold_86_80 81143 81760 - NULL(UNKNOWN)
[View Structural Homologs]
TC A58_scaffold_86 A58_scaffold_86_81 81763 82083 - 4.A.3.2.8
CAZyme A58_scaffold_86 A58_scaffold_86_82 82098 83426 - GH4
Gene ID: A58_scaffold_86_76
Type: TC
Location: 76698 - 77957 (+)
Gene ID: A58_scaffold_86_77
Type: TF
Location: 78043 - 79986 (+)
Gene ID: A58_scaffold_86_78
Type: TC
Location: 80003 - 80299 (+)
Gene ID: A58_scaffold_86_79
Type: pfam
Location: 80315 - 81052 (+)
Gene ID: A58_scaffold_86_80
Type:
Location: 81143 - 81760 (-)
Gene ID: A58_scaffold_86_81
Type: TC
Location: 81763 - 82083 (-)
Gene ID: A58_scaffold_86_82
Type: CAZyme
Location: 82098 - 83426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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