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Cluster: A58.bin_3_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A58_scaffold_86 A58_scaffold_86_2480 2643376 2644941 - GH28
TC A58_scaffold_86 A58_scaffold_86_2481 2644970 2645818 - 3.A.1.1.11
TC A58_scaffold_86 A58_scaffold_86_2482 2645827 2646732 - 3.A.1.1.11
CAZyme A58_scaffold_86 A58_scaffold_86_2483 2646748 2647902 - GH105
TC A58_scaffold_86 A58_scaffold_86_2484 2647883 2649262 - 3.A.1.1.11
pfam A58_scaffold_86 A58_scaffold_86_2485 2649578 2650204 + DUF6088
pfam A58_scaffold_86 A58_scaffold_86_2486 2650354 2651175 + AbiEii
TC A58_scaffold_86 A58_scaffold_86_2487 2651905 2653239 - 2.A.3.6.3
Gene ID: A58_scaffold_86_2480
Type: CAZyme
Location: 2643376 - 2644941 (-)
Gene ID: A58_scaffold_86_2481
Type: TC
Location: 2644970 - 2645818 (-)
Gene ID: A58_scaffold_86_2482
Type: TC
Location: 2645827 - 2646732 (-)
Gene ID: A58_scaffold_86_2483
Type: CAZyme
Location: 2646748 - 2647902 (-)
Gene ID: A58_scaffold_86_2484
Type: TC
Location: 2647883 - 2649262 (-)
Gene ID: A58_scaffold_86_2485
Type: pfam
Location: 2649578 - 2650204 (+)
Gene ID: A58_scaffold_86_2486
Type: pfam
Location: 2650354 - 2651175 (+)
Gene ID: A58_scaffold_86_2487
Type: TC
Location: 2651905 - 2653239 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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