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Cluster: A58.bin_3_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A58_scaffold_86 A58_scaffold_86_2381 2536729 2538126 - 2.A.118.1.4
peptidase A58_scaffold_86 A58_scaffold_86_2382 2538146 2539219 - M20.UNW
STP A58_scaffold_86 A58_scaffold_86_2383 2539461 2540531 + Diacid_rec
TC A58_scaffold_86 A58_scaffold_86_2384 2540613 2541542 + 1.A.23.4.2
TC A58_scaffold_86 A58_scaffold_86_2385 2541824 2543176 + 2.A.66.1.13
TF A58_scaffold_86 A58_scaffold_86_2386 2543272 2543997 - HTH_6
TC A58_scaffold_86 A58_scaffold_86_2387 2544249 2545841 + 4.A.1.1.8
CAZyme A58_scaffold_86 A58_scaffold_86_2388 2545871 2547199 + GH4
Gene ID: A58_scaffold_86_2381
Type: TC
Location: 2536729 - 2538126 (-)
Gene ID: A58_scaffold_86_2382
Type: peptidase
Location: 2538146 - 2539219 (-)
Gene ID: A58_scaffold_86_2383
Type: STP
Location: 2539461 - 2540531 (+)
Gene ID: A58_scaffold_86_2384
Type: TC
Location: 2540613 - 2541542 (+)
Gene ID: A58_scaffold_86_2385
Type: TC
Location: 2541824 - 2543176 (+)
Gene ID: A58_scaffold_86_2386
Type: TF
Location: 2543272 - 2543997 (-)
Gene ID: A58_scaffold_86_2387
Type: TC
Location: 2544249 - 2545841 (+)
Gene ID: A58_scaffold_86_2388
Type: CAZyme
Location: 2545871 - 2547199 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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