Cluster: A58.bin_3_CGC31
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 3
- Substrate:
- Genome ID: A58.bin_3
- CGC Family ID: CGCFAM_00872
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_scaffold_86 | A58_scaffold_86_2220 | 2362332 | 2363861 | - | 2.A.40.7.6 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_2221 | 2364193 | 2365620 | - | GH1 |
| TC | A58_scaffold_86 | A58_scaffold_86_2222 | 2365623 | 2367029 | - | 4.A.1.2.3 |
| TF | A58_scaffold_86 | A58_scaffold_86_2223 | 2367162 | 2367911 | - | HTH_6 |
| TC | A58_scaffold_86 | A58_scaffold_86_2224 | 2367963 | 2369048 | - | 2.A.86.1.3 |
| TC | A58_scaffold_86 | A58_scaffold_86_2225 | 2369142 | 2369756 | - | 2.A.115.2.14 |
| TC | A58_scaffold_86 | A58_scaffold_86_2226 | 2369871 | 2370890 | - | 2.A.56.1.5 |
| pfam | A58_scaffold_86 | A58_scaffold_86_2227 | 2370901 | 2371377 | - | YcxB |
| TC | A58_scaffold_86 | A58_scaffold_86_2228 | 2371465 | 2372757 | - | 2.A.56.1.5 |
| pfam | A58_scaffold_86 | A58_scaffold_86_2229 | 2372757 | 2373281 | - | DctQ |
| TC | A58_scaffold_86 | A58_scaffold_86_2230 | 2373420 | 2374553 | - | 2.A.56.1.6 |
| TF | A58_scaffold_86 | A58_scaffold_86_2231 | 2374722 | 2375510 | - | HTH_AraC | HTH_AraC |
| TC | A58_scaffold_86 | A58_scaffold_86_2232 | 2375510 | 2377000 | - | 8.A.59.2.1 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_2233 | 2377059 | 2379545 | - | CBM48 | GH13_9 |
| pfam | A58_scaffold_86 | A58_scaffold_86_2234 | 2379571 | 2380035 | - | MGS |
| pfam | A58_scaffold_86 | A58_scaffold_86_2235 | 2380073 | 2380969 | - | FAA_hydrolase |
| TC | A58_scaffold_86 | A58_scaffold_86_2236 | 2381068 | 2383698 | - | 3.A.3.2.21 |
| peptidase | A58_scaffold_86 | A58_scaffold_86_2237 | 2383836 | 2384984 | - | M20.UPW |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_2238 | 2384974 | 2386896 | - | GH13_11 |
| TC | A58_scaffold_86 | A58_scaffold_86_2239 | 2386927 | 2388750 | - | 3.A.1.120.6 |
| pfam | A58_scaffold_86 | A58_scaffold_86_2240 | 2388776 | 2389531 | - | Exo_endo_phos |
| pfam | A58_scaffold_86 | A58_scaffold_86_2241 | 2389561 | 2390046 | - | LuxS |
| TC | A58_scaffold_86 | A58_scaffold_86_2242 | 2390187 | 2391824 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | A58_scaffold_86 | A58_scaffold_86_2243 | 2391986 | 2392612 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A58_scaffold_86 | A58_scaffold_86_2244 | 2392814 | 2393575 | - | 3.A.1.3.14 |
| TC | A58_scaffold_86 | A58_scaffold_86_2245 | 2393595 | 2394254 | - | 3.A.1.3.14 |
| TC | A58_scaffold_86 | A58_scaffold_86_2246 | 2394271 | 2395146 | - | 3.A.1.3.27 |
Gene ID: A58_scaffold_86_2220
Type: TC
Location: 2362332 - 2363861 (-)
Type: TC
Location: 2362332 - 2363861 (-)
Gene ID: A58_scaffold_86_2221
Type: CAZyme
Location: 2364193 - 2365620 (-)
Type: CAZyme
Location: 2364193 - 2365620 (-)
Gene ID: A58_scaffold_86_2222
Type: TC
Location: 2365623 - 2367029 (-)
Type: TC
Location: 2365623 - 2367029 (-)
Gene ID: A58_scaffold_86_2223
Type: TF
Location: 2367162 - 2367911 (-)
Type: TF
Location: 2367162 - 2367911 (-)
Gene ID: A58_scaffold_86_2224
Type: TC
Location: 2367963 - 2369048 (-)
Type: TC
Location: 2367963 - 2369048 (-)
Gene ID: A58_scaffold_86_2225
Type: TC
Location: 2369142 - 2369756 (-)
Type: TC
Location: 2369142 - 2369756 (-)
Gene ID: A58_scaffold_86_2226
Type: TC
Location: 2369871 - 2370890 (-)
Type: TC
Location: 2369871 - 2370890 (-)
Gene ID: A58_scaffold_86_2227
Type: pfam
Location: 2370901 - 2371377 (-)
Type: pfam
Location: 2370901 - 2371377 (-)
Gene ID: A58_scaffold_86_2228
Type: TC
Location: 2371465 - 2372757 (-)
Type: TC
Location: 2371465 - 2372757 (-)
Gene ID: A58_scaffold_86_2229
Type: pfam
Location: 2372757 - 2373281 (-)
Type: pfam
Location: 2372757 - 2373281 (-)
Gene ID: A58_scaffold_86_2230
Type: TC
Location: 2373420 - 2374553 (-)
Type: TC
Location: 2373420 - 2374553 (-)
Gene ID: A58_scaffold_86_2231
Type: TF
Location: 2374722 - 2375510 (-)
Type: TF
Location: 2374722 - 2375510 (-)
Gene ID: A58_scaffold_86_2232
Type: TC
Location: 2375510 - 2377000 (-)
Type: TC
Location: 2375510 - 2377000 (-)
Gene ID: A58_scaffold_86_2233
Type: CAZyme
Location: 2377059 - 2379545 (-)
Type: CAZyme
Location: 2377059 - 2379545 (-)
Gene ID: A58_scaffold_86_2234
Type: pfam
Location: 2379571 - 2380035 (-)
Type: pfam
Location: 2379571 - 2380035 (-)
Gene ID: A58_scaffold_86_2235
Type: pfam
Location: 2380073 - 2380969 (-)
Type: pfam
Location: 2380073 - 2380969 (-)
Gene ID: A58_scaffold_86_2236
Type: TC
Location: 2381068 - 2383698 (-)
Type: TC
Location: 2381068 - 2383698 (-)
Gene ID: A58_scaffold_86_2237
Type: peptidase
Location: 2383836 - 2384984 (-)
Type: peptidase
Location: 2383836 - 2384984 (-)
Gene ID: A58_scaffold_86_2238
Type: CAZyme
Location: 2384974 - 2386896 (-)
Type: CAZyme
Location: 2384974 - 2386896 (-)
Gene ID: A58_scaffold_86_2239
Type: TC
Location: 2386927 - 2388750 (-)
Type: TC
Location: 2386927 - 2388750 (-)
Gene ID: A58_scaffold_86_2240
Type: pfam
Location: 2388776 - 2389531 (-)
Type: pfam
Location: 2388776 - 2389531 (-)
Gene ID: A58_scaffold_86_2241
Type: pfam
Location: 2389561 - 2390046 (-)
Type: pfam
Location: 2389561 - 2390046 (-)
Gene ID: A58_scaffold_86_2242
Type: TC
Location: 2390187 - 2391824 (-)
Type: TC
Location: 2390187 - 2391824 (-)
Gene ID: A58_scaffold_86_2243
Type:
Location: 2391986 - 2392612 (-)
Type:
Location: 2391986 - 2392612 (-)
Gene ID: A58_scaffold_86_2244
Type: TC
Location: 2392814 - 2393575 (-)
Type: TC
Location: 2392814 - 2393575 (-)
Gene ID: A58_scaffold_86_2245
Type: TC
Location: 2393595 - 2394254 (-)
Type: TC
Location: 2393595 - 2394254 (-)
Gene ID: A58_scaffold_86_2246
Type: TC
Location: 2394271 - 2395146 (-)
Type: TC
Location: 2394271 - 2395146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster sp001517625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.