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Cluster: A58.bin_3_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A58_scaffold_86 A58_scaffold_86_1910 2035821 2038193 - PL9_1
peptidase A58_scaffold_86 A58_scaffold_86_1911 2038240 2039118 - S09.UPW
peptidase A58_scaffold_86 A58_scaffold_86_1912 2039288 2040454 - M38.UPW
TC A58_scaffold_86 A58_scaffold_86_1913 2040451 2042385 - 3.A.1.120.6
peptidase A58_scaffold_86 A58_scaffold_86_1914 2042622 2044040 - S12.UPW
pfam A58_scaffold_86 A58_scaffold_86_1915 2044037 2045122 - MR_MLE_N | MR_MLE_C
TC A58_scaffold_86 A58_scaffold_86_1916 2045204 2046202 - 3.A.1.5.20
TC A58_scaffold_86 A58_scaffold_86_1917 2046199 2047191 - 3.A.1.5.20
TC A58_scaffold_86 A58_scaffold_86_1918 2047206 2048114 - 3.A.1.5.2
TC A58_scaffold_86 A58_scaffold_86_1919 2048122 2049054 - 3.A.1.5.11
TC A58_scaffold_86 A58_scaffold_86_1920 2049129 2050739 - 3.A.1.5.27
NULL(UNKNOWN) A58_scaffold_86 A58_scaffold_86_1921 2050873 2051298 - NULL(UNKNOWN)
[View Structural Homologs]
TC A58_scaffold_86 A58_scaffold_86_1922 2051305 2052240 - 3.A.1.5.25
TC A58_scaffold_86 A58_scaffold_86_1923 2052247 2053296 - 3.A.1.5.25
TC A58_scaffold_86 A58_scaffold_86_1924 2053313 2054242 - 3.A.1.5.19
TC A58_scaffold_86 A58_scaffold_86_1925 2054242 2055192 - 3.A.1.5.25
TC A58_scaffold_86 A58_scaffold_86_1926 2055196 2057178 - 3.A.1.5.25
Gene ID: A58_scaffold_86_1910
Type: CAZyme
Location: 2035821 - 2038193 (-)
Gene ID: A58_scaffold_86_1911
Type: peptidase
Location: 2038240 - 2039118 (-)
Gene ID: A58_scaffold_86_1912
Type: peptidase
Location: 2039288 - 2040454 (-)
Gene ID: A58_scaffold_86_1913
Type: TC
Location: 2040451 - 2042385 (-)
Gene ID: A58_scaffold_86_1914
Type: peptidase
Location: 2042622 - 2044040 (-)
Gene ID: A58_scaffold_86_1915
Type: pfam
Location: 2044037 - 2045122 (-)
Gene ID: A58_scaffold_86_1916
Type: TC
Location: 2045204 - 2046202 (-)
Gene ID: A58_scaffold_86_1917
Type: TC
Location: 2046199 - 2047191 (-)
Gene ID: A58_scaffold_86_1918
Type: TC
Location: 2047206 - 2048114 (-)
Gene ID: A58_scaffold_86_1919
Type: TC
Location: 2048122 - 2049054 (-)
Gene ID: A58_scaffold_86_1920
Type: TC
Location: 2049129 - 2050739 (-)
Gene ID: A58_scaffold_86_1921
Type:
Location: 2050873 - 2051298 (-)
Gene ID: A58_scaffold_86_1922
Type: TC
Location: 2051305 - 2052240 (-)
Gene ID: A58_scaffold_86_1923
Type: TC
Location: 2052247 - 2053296 (-)
Gene ID: A58_scaffold_86_1924
Type: TC
Location: 2053313 - 2054242 (-)
Gene ID: A58_scaffold_86_1925
Type: TC
Location: 2054242 - 2055192 (-)
Gene ID: A58_scaffold_86_1926
Type: TC
Location: 2055196 - 2057178 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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