Cluster: A58.bin_3_CGC27
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: A58.bin_3
- CGC Family ID: CGCFAM_06793
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A58_scaffold_86 | A58_scaffold_86_1880 | 1998165 | 2000243 | - | PL12_1 |
| TC | A58_scaffold_86 | A58_scaffold_86_1881 | 2000325 | 2001134 | - | 4.A.6.1.14 |
| TC | A58_scaffold_86 | A58_scaffold_86_1882 | 2001124 | 2001912 | - | 4.A.6.1.14 |
| TC | A58_scaffold_86 | A58_scaffold_86_1883 | 2001934 | 2002425 | - | 4.A.6.1.14 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_1884 | 2002444 | 2003634 | - | GH88 |
| TC | A58_scaffold_86 | A58_scaffold_86_1885 | 2003675 | 2004118 | - | 4.A.6.1.14 |
| pfam | A58_scaffold_86 | A58_scaffold_86_1886 | 2004688 | 2005311 | - | PhoU_div |
| TC | A58_scaffold_86 | A58_scaffold_86_1887 | 2005338 | 2006390 | - | 2.A.20.1.5 |
| pfam | A58_scaffold_86 | A58_scaffold_86_1888 | 2006462 | 2006782 | - | CdAMP_rec |
| TC | A58_scaffold_86 | A58_scaffold_86_1889 | 2006804 | 2008321 | - | 2.A.118.1.8 |
| pfam | A58_scaffold_86 | A58_scaffold_86_1890 | 2014048 | 2016873 | - | UvrA_DNA-bind | UvrA_inter |
| pfam | A58_scaffold_86 | A58_scaffold_86_1891 | 2016967 | 2017251 | - | DUF6809 |
| TC | A58_scaffold_86 | A58_scaffold_86_1892 | 2017376 | 2019265 | - | 3.A.16.1.1 |
| TC | A58_scaffold_86 | A58_scaffold_86_1893 | 2019449 | 2020198 | - | 3.A.1.3.25 |
| TC | A58_scaffold_86 | A58_scaffold_86_1894 | 2020188 | 2020880 | - | 3.A.1.3.20 |
| TC | A58_scaffold_86 | A58_scaffold_86_1895 | 2021062 | 2021904 | - | 3.A.1.3.27 |
Gene ID: A58_scaffold_86_1880
Type: CAZyme
Location: 1998165 - 2000243 (-)
Type: CAZyme
Location: 1998165 - 2000243 (-)
Gene ID: A58_scaffold_86_1881
Type: TC
Location: 2000325 - 2001134 (-)
Type: TC
Location: 2000325 - 2001134 (-)
Gene ID: A58_scaffold_86_1882
Type: TC
Location: 2001124 - 2001912 (-)
Type: TC
Location: 2001124 - 2001912 (-)
Gene ID: A58_scaffold_86_1883
Type: TC
Location: 2001934 - 2002425 (-)
Type: TC
Location: 2001934 - 2002425 (-)
Gene ID: A58_scaffold_86_1884
Type: CAZyme
Location: 2002444 - 2003634 (-)
Type: CAZyme
Location: 2002444 - 2003634 (-)
Gene ID: A58_scaffold_86_1885
Type: TC
Location: 2003675 - 2004118 (-)
Type: TC
Location: 2003675 - 2004118 (-)
Gene ID: A58_scaffold_86_1886
Type: pfam
Location: 2004688 - 2005311 (-)
Type: pfam
Location: 2004688 - 2005311 (-)
Gene ID: A58_scaffold_86_1887
Type: TC
Location: 2005338 - 2006390 (-)
Type: TC
Location: 2005338 - 2006390 (-)
Gene ID: A58_scaffold_86_1888
Type: pfam
Location: 2006462 - 2006782 (-)
Type: pfam
Location: 2006462 - 2006782 (-)
Gene ID: A58_scaffold_86_1889
Type: TC
Location: 2006804 - 2008321 (-)
Type: TC
Location: 2006804 - 2008321 (-)
Gene ID: A58_scaffold_86_1890
Type: pfam
Location: 2014048 - 2016873 (-)
Type: pfam
Location: 2014048 - 2016873 (-)
Gene ID: A58_scaffold_86_1891
Type: pfam
Location: 2016967 - 2017251 (-)
Type: pfam
Location: 2016967 - 2017251 (-)
Gene ID: A58_scaffold_86_1892
Type: TC
Location: 2017376 - 2019265 (-)
Type: TC
Location: 2017376 - 2019265 (-)
Gene ID: A58_scaffold_86_1893
Type: TC
Location: 2019449 - 2020198 (-)
Type: TC
Location: 2019449 - 2020198 (-)
Gene ID: A58_scaffold_86_1894
Type: TC
Location: 2020188 - 2020880 (-)
Type: TC
Location: 2020188 - 2020880 (-)
Gene ID: A58_scaffold_86_1895
Type: TC
Location: 2021062 - 2021904 (-)
Type: TC
Location: 2021062 - 2021904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster sp001517625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A58_scaffold_86_1893 | vegan > omnivore | 1.16492 | 0.02695 |