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Cluster: A58.bin_3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A58_scaffold_86 A58_scaffold_86_736 790435 791424 + CE8
TF A58_scaffold_86 A58_scaffold_86_737 791451 793088 + HTH_AraC | HTH_AraC
TC A58_scaffold_86 A58_scaffold_86_738 793089 794891 + 8.A.59.2.1
STP A58_scaffold_86 A58_scaffold_86_739 794878 795849 + Peripla_BP_1
TC A58_scaffold_86 A58_scaffold_86_740 795867 796925 + 3.A.1.2.3
STP A58_scaffold_86 A58_scaffold_86_741 797093 798295 + Peripla_BP_3
TC A58_scaffold_86 A58_scaffold_86_742 798393 799895 + 3.A.1.2.3
TC A58_scaffold_86 A58_scaffold_86_743 799913 800992 + 3.A.1.2.3
Gene ID: A58_scaffold_86_736
Type: CAZyme
Location: 790435 - 791424 (+)
Gene ID: A58_scaffold_86_737
Type: TF
Location: 791451 - 793088 (+)
Gene ID: A58_scaffold_86_738
Type: TC
Location: 793089 - 794891 (+)
Gene ID: A58_scaffold_86_739
Type: STP
Location: 794878 - 795849 (+)
Gene ID: A58_scaffold_86_740
Type: TC
Location: 795867 - 796925 (+)
Gene ID: A58_scaffold_86_741
Type: STP
Location: 797093 - 798295 (+)
Gene ID: A58_scaffold_86_742
Type: TC
Location: 798393 - 799895 (+)
Gene ID: A58_scaffold_86_743
Type: TC
Location: 799913 - 800992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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