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Cluster: A58.bin_3_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A58_scaffold_86 A58_scaffold_86_376 390815 393874 + GH2
pfam A58_scaffold_86 A58_scaffold_86_377 393894 395048 + MFS_1
CAZyme A58_scaffold_86 A58_scaffold_86_378 395083 398301 + GH38
STP A58_scaffold_86 A58_scaffold_86_379 398471 399793 + SBP_bac_1
CAZyme A58_scaffold_86 A58_scaffold_86_380 400028 401131 + GH105
TC A58_scaffold_86 A58_scaffold_86_381 401156 402043 + 3.A.1.1.20
TC A58_scaffold_86 A58_scaffold_86_382 402043 402879 + 3.A.1.1.39
Gene ID: A58_scaffold_86_376
Type: CAZyme
Location: 390815 - 393874 (+)
Gene ID: A58_scaffold_86_377
Type: pfam
Location: 393894 - 395048 (+)
Gene ID: A58_scaffold_86_378
Type: CAZyme
Location: 395083 - 398301 (+)
Gene ID: A58_scaffold_86_379
Type: STP
Location: 398471 - 399793 (+)
Gene ID: A58_scaffold_86_380
Type: CAZyme
Location: 400028 - 401131 (+)
Gene ID: A58_scaffold_86_381
Type: TC
Location: 401156 - 402043 (+)
Gene ID: A58_scaffold_86_382
Type: TC
Location: 402043 - 402879 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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