Cluster: A58.bin_3_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: A58.bin_3
- CGC Family ID: CGCFAM_00353
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A58_scaffold_86 | A58_scaffold_86_323 | 331007 | 332824 | + | GH2 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_324 | 332814 | 335897 | + | GH2 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_325 | 335919 | 337736 | - | PL33_1 |
| TF | A58_scaffold_86 | A58_scaffold_86_326 | 337741 | 339417 | - | HTH_AraC | HTH_AraC |
| TC | A58_scaffold_86 | A58_scaffold_86_327 | 339366 | 341225 | - | 8.A.59.2.1 |
| STP | A58_scaffold_86 | A58_scaffold_86_328 | 341492 | 342844 | + | SBP_bac_1 |
| TC | A58_scaffold_86 | A58_scaffold_86_329 | 342928 | 344001 | + | 3.A.1.1.34 |
| TC | A58_scaffold_86 | A58_scaffold_86_330 | 344017 | 344853 | + | 3.A.1.1.11 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_331 | 344896 | 346077 | + | GH88 |
| CAZyme | A58_scaffold_86 | A58_scaffold_86_332 | 346118 | 348133 | + | PL12_1 |
| pfam | A58_scaffold_86 | A58_scaffold_86_333 | 348263 | 348841 | + | 5-FTHF_cyc-lig |
| pfam | A58_scaffold_86 | A58_scaffold_86_334 | 348942 | 350192 | + | PG_binding_1 |
| TC | A58_scaffold_86 | A58_scaffold_86_335 | 350400 | 350810 | + | 4.A.1.1.13 |
Gene ID: A58_scaffold_86_323
Type: CAZyme
Location: 331007 - 332824 (+)
Type: CAZyme
Location: 331007 - 332824 (+)
Gene ID: A58_scaffold_86_324
Type: CAZyme
Location: 332814 - 335897 (+)
Type: CAZyme
Location: 332814 - 335897 (+)
Gene ID: A58_scaffold_86_325
Type: CAZyme
Location: 335919 - 337736 (-)
Type: CAZyme
Location: 335919 - 337736 (-)
Gene ID: A58_scaffold_86_326
Type: TF
Location: 337741 - 339417 (-)
Type: TF
Location: 337741 - 339417 (-)
Gene ID: A58_scaffold_86_327
Type: TC
Location: 339366 - 341225 (-)
Type: TC
Location: 339366 - 341225 (-)
Gene ID: A58_scaffold_86_328
Type: STP
Location: 341492 - 342844 (+)
Type: STP
Location: 341492 - 342844 (+)
Gene ID: A58_scaffold_86_329
Type: TC
Location: 342928 - 344001 (+)
Type: TC
Location: 342928 - 344001 (+)
Gene ID: A58_scaffold_86_330
Type: TC
Location: 344017 - 344853 (+)
Type: TC
Location: 344017 - 344853 (+)
Gene ID: A58_scaffold_86_331
Type: CAZyme
Location: 344896 - 346077 (+)
Type: CAZyme
Location: 344896 - 346077 (+)
Gene ID: A58_scaffold_86_332
Type: CAZyme
Location: 346118 - 348133 (+)
Type: CAZyme
Location: 346118 - 348133 (+)
Gene ID: A58_scaffold_86_333
Type: pfam
Location: 348263 - 348841 (+)
Type: pfam
Location: 348263 - 348841 (+)
Gene ID: A58_scaffold_86_334
Type: pfam
Location: 348942 - 350192 (+)
Type: pfam
Location: 348942 - 350192 (+)
Gene ID: A58_scaffold_86_335
Type: TC
Location: 350400 - 350810 (+)
Type: TC
Location: 350400 - 350810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster sp001517625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.