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Cluster: A58.bin_3_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A58_scaffold_86 A58_scaffold_86_88 88366 89667 - 2.A.56.1.5
TC A58_scaffold_86 A58_scaffold_86_89 89672 90169 - 2.A.56.1.5
TC A58_scaffold_86 A58_scaffold_86_90 90185 91216 - 2.A.56.1.5
peptidase A58_scaffold_86 A58_scaffold_86_91 91236 92603 + S12.UPW
TC A58_scaffold_86 A58_scaffold_86_92 92581 94467 + 9.B.33.1.1
TF A58_scaffold_86 A58_scaffold_86_93 94436 95185 + HTH_AraC | HTH_AraC
STP A58_scaffold_86 A58_scaffold_86_94 95317 96669 + SBP_bac_1
TC A58_scaffold_86 A58_scaffold_86_95 96694 97641 + 3.A.1.1.11
TC A58_scaffold_86 A58_scaffold_86_96 97638 98492 + 3.A.1.1.11
CAZyme A58_scaffold_86 A58_scaffold_86_97 98514 100562 + PL11
CAZyme A58_scaffold_86 A58_scaffold_86_98 100562 101968 + GH4
TC A58_scaffold_86 A58_scaffold_86_99 102166 102990 + 2.A.79.1.5
pfam A58_scaffold_86 A58_scaffold_86_100 102987 103448 + ThrE | ThrE_2
TC A58_scaffold_86 A58_scaffold_86_101 103451 104182 + 9.B.158.1.1
Gene ID: A58_scaffold_86_88
Type: TC
Location: 88366 - 89667 (-)
Gene ID: A58_scaffold_86_89
Type: TC
Location: 89672 - 90169 (-)
Gene ID: A58_scaffold_86_90
Type: TC
Location: 90185 - 91216 (-)
Gene ID: A58_scaffold_86_91
Type: peptidase
Location: 91236 - 92603 (+)
Gene ID: A58_scaffold_86_92
Type: TC
Location: 92581 - 94467 (+)
Gene ID: A58_scaffold_86_93
Type: TF
Location: 94436 - 95185 (+)
Gene ID: A58_scaffold_86_94
Type: STP
Location: 95317 - 96669 (+)
Gene ID: A58_scaffold_86_95
Type: TC
Location: 96694 - 97641 (+)
Gene ID: A58_scaffold_86_96
Type: TC
Location: 97638 - 98492 (+)
Gene ID: A58_scaffold_86_97
Type: CAZyme
Location: 98514 - 100562 (+)
Gene ID: A58_scaffold_86_98
Type: CAZyme
Location: 100562 - 101968 (+)
Gene ID: A58_scaffold_86_99
Type: TC
Location: 102166 - 102990 (+)
Gene ID: A58_scaffold_86_100
Type: pfam
Location: 102987 - 103448 (+)
Gene ID: A58_scaffold_86_101
Type: TC
Location: 103451 - 104182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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