Cluster: A58.bin_1_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A58.bin_1
- CGC Family ID: CGCFAM_00132
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_633 | 681909 | 682955 | - | 9.B.18.2.1 |
| pfam | A58_contig_103 | A58_contig_103_634 | 682979 | 684259 | - | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | A58_contig_103 | A58_contig_103_635 | 684770 | 685975 | - | GT4 |
| pfam | A58_contig_103 | A58_contig_103_636 | 685986 | 687209 | - | DUF7657 |
| CAZyme | A58_contig_103 | A58_contig_103_637 | 687213 | 688427 | - | GT4 |
Gene ID: A58_contig_103_633
Type: TC
Location: 681909 - 682955 (-)
Type: TC
Location: 681909 - 682955 (-)
Gene ID: A58_contig_103_634
Type: pfam
Location: 682979 - 684259 (-)
Type: pfam
Location: 682979 - 684259 (-)
Gene ID: A58_contig_103_635
Type: CAZyme
Location: 684770 - 685975 (-)
Type: CAZyme
Location: 684770 - 685975 (-)
Gene ID: A58_contig_103_636
Type: pfam
Location: 685986 - 687209 (-)
Type: pfam
Location: 685986 - 687209 (-)
Gene ID: A58_contig_103_637
Type: CAZyme
Location: 687213 - 688427 (-)
Type: CAZyme
Location: 687213 - 688427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A58_contig_103_634 | vegetarian > omnivore | 3.18337 | 0.00821 |