Cluster: A58.bin_1_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: A58.bin_1
- CGC Family ID: CGCFAM_00078
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_2066 | 2296785 | 2298302 | - | 2.A.2.1.1 |
| CAZyme | A58_contig_103 | A58_contig_103_2067 | 2298694 | 2300937 | + | GH3 |
| CAZyme | A58_contig_103 | A58_contig_103_2068 | 2301144 | 2302967 | + | GH2 |
| TC | A58_contig_103 | A58_contig_103_2069 | 2303251 | 2304993 | + | 3.A.1.106.12 |
| TC | A58_contig_103 | A58_contig_103_2070 | 2305014 | 2306630 | + | 3.A.1.106.2 |
Gene ID: A58_contig_103_2066
Type: TC
Location: 2296785 - 2298302 (-)
Type: TC
Location: 2296785 - 2298302 (-)
Gene ID: A58_contig_103_2067
Type: CAZyme
Location: 2298694 - 2300937 (+)
Type: CAZyme
Location: 2298694 - 2300937 (+)
Gene ID: A58_contig_103_2068
Type: CAZyme
Location: 2301144 - 2302967 (+)
Type: CAZyme
Location: 2301144 - 2302967 (+)
Gene ID: A58_contig_103_2069
Type: TC
Location: 2303251 - 2304993 (+)
Type: TC
Location: 2303251 - 2304993 (+)
Gene ID: A58_contig_103_2070
Type: TC
Location: 2305014 - 2306630 (+)
Type: TC
Location: 2305014 - 2306630 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.