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Cluster: A58.bin_1_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A58_contig_103 A58_contig_103_1774 1973687 1974667 - GT2
TF A58_contig_103 A58_contig_103_1775 1974680 1975525 - 0037767
pfam A58_contig_103 A58_contig_103_1776 1975714 1976694 + VitK2_biosynth | OpuAC | NMT1 | Phosphonate-bd | NMT1_2
TC A58_contig_103 A58_contig_103_1777 1976735 1978015 - 2.A.26.1.9
pfam A58_contig_103 A58_contig_103_1778 1978165 1978941 + BPD_transp_1
TC A58_contig_103 A58_contig_103_1779 1978938 1979507 + 3.A.1.17.12
pfam A58_contig_103 A58_contig_103_1780 1980034 1981116 - Radical_SAM | HemN_C
TC A58_contig_103 A58_contig_103_1781 1981233 1981937 + 1.A.14.2.2
Gene ID: A58_contig_103_1774
Type: CAZyme
Location: 1973687 - 1974667 (-)
Gene ID: A58_contig_103_1775
Type: TF
Location: 1974680 - 1975525 (-)
Gene ID: A58_contig_103_1776
Type: pfam
Location: 1975714 - 1976694 (+)
Gene ID: A58_contig_103_1777
Type: TC
Location: 1976735 - 1978015 (-)
Gene ID: A58_contig_103_1778
Type: pfam
Location: 1978165 - 1978941 (+)
Gene ID: A58_contig_103_1779
Type: TC
Location: 1978938 - 1979507 (+)
Gene ID: A58_contig_103_1780
Type: pfam
Location: 1980034 - 1981116 (-)
Gene ID: A58_contig_103_1781
Type: TC
Location: 1981233 - 1981937 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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