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Cluster: A58.bin_1_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A58_contig_103 A58_contig_103_1747 1941900 1943336 + 4.A.1.2.7
CAZyme A58_contig_103 A58_contig_103_1748 1943329 1944390 + GH170
pfam A58_contig_103 A58_contig_103_1749 1944387 1945223 + S6PP | Hydrolase_3 | Hydrolase_3
TC A58_contig_103 A58_contig_103_1750 1945513 1946832 + 3.A.1.121.4
pfam A58_contig_103 A58_contig_103_1751 1947363 1948607 - tRNA-synt_His
TC A58_contig_103 A58_contig_103_1752 1948781 1949995 + 2.A.1.11.1
NULL(UNKNOWN) A58_contig_103 A58_contig_103_1753 1950265 1950966 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A58_contig_103 A58_contig_103_1754 1950984 1951982 + GGGtGRT
TC A58_contig_103 A58_contig_103_1755 1952148 1954079 + 3.D.10.1.4
pfam A58_contig_103 A58_contig_103_1756 1954076 1954429 + NusG_II
pfam A58_contig_103 A58_contig_103_1757 1954855 1956498 + HlyD_3 | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC A58_contig_103 A58_contig_103_1758 1956502 1957242 + 3.A.1.122.2
TC A58_contig_103 A58_contig_103_1759 1957239 1958438 + 3.A.1.122.1
pfam A58_contig_103 A58_contig_103_1760 1958487 1960583 + SLH
STP A58_contig_103 A58_contig_103_1761 1960580 1961362 + Pribosyltran
TC A58_contig_103 A58_contig_103_1762 1961650 1962486 - 3.A.1.3.28
TC A58_contig_103 A58_contig_103_1763 1962539 1963288 - 3.A.1.3.14
TC A58_contig_103 A58_contig_103_1764 1963304 1963987 - 3.A.1.3.28
pfam A58_contig_103 A58_contig_103_1765 1964309 1965346 + NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
pfam A58_contig_103 A58_contig_103_1766 1965524 1966309 + Zn_dep_PLPC
TC A58_contig_103 A58_contig_103_1767 1966353 1967621 + 2.A.1.24.4
TC A58_contig_103 A58_contig_103_1768 1968137 1968997 + 3.A.1.24.5
TC A58_contig_103 A58_contig_103_1769 1969051 1970064 + 3.A.1.24.1
TC A58_contig_103 A58_contig_103_1770 1970061 1970717 + 3.A.1.24.5
Gene ID: A58_contig_103_1747
Type: TC
Location: 1941900 - 1943336 (+)
Gene ID: A58_contig_103_1748
Type: CAZyme
Location: 1943329 - 1944390 (+)
Gene ID: A58_contig_103_1749
Type: pfam
Location: 1944387 - 1945223 (+)
Gene ID: A58_contig_103_1750
Type: TC
Location: 1945513 - 1946832 (+)
Gene ID: A58_contig_103_1751
Type: pfam
Location: 1947363 - 1948607 (-)
Gene ID: A58_contig_103_1752
Type: TC
Location: 1948781 - 1949995 (+)
Gene ID: A58_contig_103_1753
Type:
Location: 1950265 - 1950966 (+)
Gene ID: A58_contig_103_1754
Type: pfam
Location: 1950984 - 1951982 (+)
Gene ID: A58_contig_103_1755
Type: TC
Location: 1952148 - 1954079 (+)
Gene ID: A58_contig_103_1756
Type: pfam
Location: 1954076 - 1954429 (+)
Gene ID: A58_contig_103_1757
Type: pfam
Location: 1954855 - 1956498 (+)
Gene ID: A58_contig_103_1758
Type: TC
Location: 1956502 - 1957242 (+)
Gene ID: A58_contig_103_1759
Type: TC
Location: 1957239 - 1958438 (+)
Gene ID: A58_contig_103_1760
Type: pfam
Location: 1958487 - 1960583 (+)
Gene ID: A58_contig_103_1761
Type: STP
Location: 1960580 - 1961362 (+)
Gene ID: A58_contig_103_1762
Type: TC
Location: 1961650 - 1962486 (-)
Gene ID: A58_contig_103_1763
Type: TC
Location: 1962539 - 1963288 (-)
Gene ID: A58_contig_103_1764
Type: TC
Location: 1963304 - 1963987 (-)
Gene ID: A58_contig_103_1765
Type: pfam
Location: 1964309 - 1965346 (+)
Gene ID: A58_contig_103_1766
Type: pfam
Location: 1965524 - 1966309 (+)
Gene ID: A58_contig_103_1767
Type: TC
Location: 1966353 - 1967621 (+)
Gene ID: A58_contig_103_1768
Type: TC
Location: 1968137 - 1968997 (+)
Gene ID: A58_contig_103_1769
Type: TC
Location: 1969051 - 1970064 (+)
Gene ID: A58_contig_103_1770
Type: TC
Location: 1970061 - 1970717 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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