Cluster: A58.bin_1_CGC28
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: A58.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_1665 | 1841414 | 1841845 | + | 1.A.22.1.3 |
| peptidase | A58_contig_103 | A58_contig_103_1666 | 1841938 | 1843629 | - | M03.UPC |
| TC | A58_contig_103 | A58_contig_103_1667 | 1843786 | 1844673 | - | 2.A.119.2.1 |
| peptidase | A58_contig_103 | A58_contig_103_1668 | 1844964 | 1846172 | + | C59.UPW |
| TC | A58_contig_103 | A58_contig_103_1669 | 1846288 | 1847853 | - | 2.A.2.1.1 |
| NULL(UNKNOWN) | A58_contig_103 | A58_contig_103_1670 | 1847946 | 1848383 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A58_contig_103 | A58_contig_103_1671 | 1848385 | 1851639 | - | GH3 |
| CAZyme | A58_contig_103 | A58_contig_103_1672 | 1851726 | 1853645 | - | GH2 |
| pfam | A58_contig_103 | A58_contig_103_1673 | 1853878 | 1855167 | - | HATPase_c_5 |
| TF | A58_contig_103 | A58_contig_103_1674 | 1855164 | 1855874 | - | LytTR |
| CAZyme | A58_contig_103 | A58_contig_103_1675 | 1856050 | 1858212 | - | GH112 |
| pfam | A58_contig_103 | A58_contig_103_1676 | 1858255 | 1858443 | - | DUF6903 |
| TC | A58_contig_103 | A58_contig_103_1677 | 1858455 | 1859354 | - | 3.A.1.1.25 |
| TC | A58_contig_103 | A58_contig_103_1678 | 1859372 | 1860256 | - | 3.A.1.1.42 |
Gene ID: A58_contig_103_1665
Type: TC
Location: 1841414 - 1841845 (+)
Type: TC
Location: 1841414 - 1841845 (+)
Gene ID: A58_contig_103_1666
Type: peptidase
Location: 1841938 - 1843629 (-)
Type: peptidase
Location: 1841938 - 1843629 (-)
Gene ID: A58_contig_103_1667
Type: TC
Location: 1843786 - 1844673 (-)
Type: TC
Location: 1843786 - 1844673 (-)
Gene ID: A58_contig_103_1668
Type: peptidase
Location: 1844964 - 1846172 (+)
Type: peptidase
Location: 1844964 - 1846172 (+)
Gene ID: A58_contig_103_1669
Type: TC
Location: 1846288 - 1847853 (-)
Type: TC
Location: 1846288 - 1847853 (-)
Gene ID: A58_contig_103_1670
Type:
Location: 1847946 - 1848383 (-)
Type:
Location: 1847946 - 1848383 (-)
Gene ID: A58_contig_103_1671
Type: CAZyme
Location: 1848385 - 1851639 (-)
Type: CAZyme
Location: 1848385 - 1851639 (-)
Gene ID: A58_contig_103_1672
Type: CAZyme
Location: 1851726 - 1853645 (-)
Type: CAZyme
Location: 1851726 - 1853645 (-)
Gene ID: A58_contig_103_1673
Type: pfam
Location: 1853878 - 1855167 (-)
Type: pfam
Location: 1853878 - 1855167 (-)
Gene ID: A58_contig_103_1674
Type: TF
Location: 1855164 - 1855874 (-)
Type: TF
Location: 1855164 - 1855874 (-)
Gene ID: A58_contig_103_1675
Type: CAZyme
Location: 1856050 - 1858212 (-)
Type: CAZyme
Location: 1856050 - 1858212 (-)
Gene ID: A58_contig_103_1676
Type: pfam
Location: 1858255 - 1858443 (-)
Type: pfam
Location: 1858255 - 1858443 (-)
Gene ID: A58_contig_103_1677
Type: TC
Location: 1858455 - 1859354 (-)
Type: TC
Location: 1858455 - 1859354 (-)
Gene ID: A58_contig_103_1678
Type: TC
Location: 1859372 - 1860256 (-)
Type: TC
Location: 1859372 - 1860256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.