Cluster: A58.bin_1_CGC26
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: A58.bin_1
- CGC Family ID: CGCFAM_01576
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_1547 | 1705442 | 1706233 | + | 3.A.1.103.6 |
| TC | A58_contig_103 | A58_contig_103_1548 | 1706245 | 1706988 | + | 3.A.1.103.6 |
| CAZyme | A58_contig_103 | A58_contig_103_1549 | 1707003 | 1708886 | + | GT2 |
| pfam | A58_contig_103 | A58_contig_103_1550 | 1708886 | 1709422 | + | DUF5662 |
| NULL(UNKNOWN) | A58_contig_103 | A58_contig_103_1551 | 1709882 | 1710013 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A58_contig_103 | A58_contig_103_1552 | 1710352 | 1711674 | + | 3.D.6.1.2 |
| TC | A58_contig_103 | A58_contig_103_1553 | 1711674 | 1712633 | + | 3.D.6.1.2 |
| pfam | A58_contig_103 | A58_contig_103_1554 | 1712630 | 1713175 | + | FMN_bind |
| TC | A58_contig_103 | A58_contig_103_1555 | 1713192 | 1713866 | + | 3.D.6.1.2 |
| TC | A58_contig_103 | A58_contig_103_1556 | 1713863 | 1714495 | + | 3.D.6.1.2 |
| TC | A58_contig_103 | A58_contig_103_1557 | 1714512 | 1715309 | + | 3.D.6.1.3 |
| TC | A58_contig_103 | A58_contig_103_1558 | 1715964 | 1717103 | + | 2.A.1.15.18 |
Gene ID: A58_contig_103_1547
Type: TC
Location: 1705442 - 1706233 (+)
Type: TC
Location: 1705442 - 1706233 (+)
Gene ID: A58_contig_103_1548
Type: TC
Location: 1706245 - 1706988 (+)
Type: TC
Location: 1706245 - 1706988 (+)
Gene ID: A58_contig_103_1549
Type: CAZyme
Location: 1707003 - 1708886 (+)
Type: CAZyme
Location: 1707003 - 1708886 (+)
Gene ID: A58_contig_103_1550
Type: pfam
Location: 1708886 - 1709422 (+)
Type: pfam
Location: 1708886 - 1709422 (+)
Gene ID: A58_contig_103_1551
Type:
Location: 1709882 - 1710013 (-)
Type:
Location: 1709882 - 1710013 (-)
Gene ID: A58_contig_103_1552
Type: TC
Location: 1710352 - 1711674 (+)
Type: TC
Location: 1710352 - 1711674 (+)
Gene ID: A58_contig_103_1553
Type: TC
Location: 1711674 - 1712633 (+)
Type: TC
Location: 1711674 - 1712633 (+)
Gene ID: A58_contig_103_1554
Type: pfam
Location: 1712630 - 1713175 (+)
Type: pfam
Location: 1712630 - 1713175 (+)
Gene ID: A58_contig_103_1555
Type: TC
Location: 1713192 - 1713866 (+)
Type: TC
Location: 1713192 - 1713866 (+)
Gene ID: A58_contig_103_1556
Type: TC
Location: 1713863 - 1714495 (+)
Type: TC
Location: 1713863 - 1714495 (+)
Gene ID: A58_contig_103_1557
Type: TC
Location: 1714512 - 1715309 (+)
Type: TC
Location: 1714512 - 1715309 (+)
Gene ID: A58_contig_103_1558
Type: TC
Location: 1715964 - 1717103 (+)
Type: TC
Location: 1715964 - 1717103 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.