Cluster: A58.bin_1_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: A58.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_1257 | 1365536 | 1366183 | + | 3.A.1.25.5 |
| CAZyme | A58_contig_103 | A58_contig_103_1258 | 1366495 | 1370613 | + | CE12 | PL9_1 |
| TC | A58_contig_103 | A58_contig_103_1259 | 1370761 | 1372134 | + | 2.A.22.5.3 |
| pfam | A58_contig_103 | A58_contig_103_1260 | 1372489 | 1372905 | - | DUF2992 |
| pfam | A58_contig_103 | A58_contig_103_1261 | 1373186 | 1373983 | - | HpcH_HpaI |
| TC | A58_contig_103 | A58_contig_103_1262 | 1374117 | 1375409 | - | 2.A.56.1.6 |
| pfam | A58_contig_103 | A58_contig_103_1263 | 1375430 | 1375945 | - | DctQ |
| TC | A58_contig_103 | A58_contig_103_1264 | 1376041 | 1377123 | - | 2.A.56.1.2 |
| TF | A58_contig_103 | A58_contig_103_1265 | 1377852 | 1378535 | + | GntR |
| pfam | A58_contig_103 | A58_contig_103_1266 | 1378799 | 1379386 | + | Chromate_transp |
| TC | A58_contig_103 | A58_contig_103_1267 | 1379383 | 1379946 | + | 2.A.51.1.5 |
Gene ID: A58_contig_103_1257
Type: TC
Location: 1365536 - 1366183 (+)
Type: TC
Location: 1365536 - 1366183 (+)
Gene ID: A58_contig_103_1258
Type: CAZyme
Location: 1366495 - 1370613 (+)
Type: CAZyme
Location: 1366495 - 1370613 (+)
Gene ID: A58_contig_103_1259
Type: TC
Location: 1370761 - 1372134 (+)
Type: TC
Location: 1370761 - 1372134 (+)
Gene ID: A58_contig_103_1260
Type: pfam
Location: 1372489 - 1372905 (-)
Type: pfam
Location: 1372489 - 1372905 (-)
Gene ID: A58_contig_103_1261
Type: pfam
Location: 1373186 - 1373983 (-)
Type: pfam
Location: 1373186 - 1373983 (-)
Gene ID: A58_contig_103_1262
Type: TC
Location: 1374117 - 1375409 (-)
Type: TC
Location: 1374117 - 1375409 (-)
Gene ID: A58_contig_103_1263
Type: pfam
Location: 1375430 - 1375945 (-)
Type: pfam
Location: 1375430 - 1375945 (-)
Gene ID: A58_contig_103_1264
Type: TC
Location: 1376041 - 1377123 (-)
Type: TC
Location: 1376041 - 1377123 (-)
Gene ID: A58_contig_103_1265
Type: TF
Location: 1377852 - 1378535 (+)
Type: TF
Location: 1377852 - 1378535 (+)
Gene ID: A58_contig_103_1266
Type: pfam
Location: 1378799 - 1379386 (+)
Type: pfam
Location: 1378799 - 1379386 (+)
Gene ID: A58_contig_103_1267
Type: TC
Location: 1379383 - 1379946 (+)
Type: TC
Location: 1379383 - 1379946 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A58_contig_103_1261 | vegetarian > vegan | 3.49330 | 0.01287 |