Cluster: A58.bin_1_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A58.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_1152 | 1258275 | 1259258 | + | 8.A.5.1.4 |
| STP | A58_contig_103 | A58_contig_103_1153 | 1259319 | 1259810 | - | Sigma70_r2 | Sigma70_r4_2 |
| pfam | A58_contig_103 | A58_contig_103_1154 | 1259815 | 1260528 | - | zf-HC2 |
| CAZyme | A58_contig_103 | A58_contig_103_1155 | 1260603 | 1262561 | - | GH13_14 |
| TC | A58_contig_103 | A58_contig_103_1156 | 1262709 | 1264505 | - | 3.A.1.106.2 |
Gene ID: A58_contig_103_1152
Type: TC
Location: 1258275 - 1259258 (+)
Type: TC
Location: 1258275 - 1259258 (+)
Gene ID: A58_contig_103_1153
Type: STP
Location: 1259319 - 1259810 (-)
Type: STP
Location: 1259319 - 1259810 (-)
Gene ID: A58_contig_103_1154
Type: pfam
Location: 1259815 - 1260528 (-)
Type: pfam
Location: 1259815 - 1260528 (-)
Gene ID: A58_contig_103_1155
Type: CAZyme
Location: 1260603 - 1262561 (-)
Type: CAZyme
Location: 1260603 - 1262561 (-)
Gene ID: A58_contig_103_1156
Type: TC
Location: 1262709 - 1264505 (-)
Type: TC
Location: 1262709 - 1264505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.