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Cluster: A58.bin_1_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A58_contig_103 A58_contig_103_1112 1214399 1215823 - 2.A.25.1.9
CAZyme A58_contig_103 A58_contig_103_1113 1216453 1218222 + GH2
TC A58_contig_103 A58_contig_103_1114 1218290 1219642 - 2.A.37.3.3
pfam A58_contig_103 A58_contig_103_1115 1219912 1220268 - SpoVAC_SpoVAEB
pfam A58_contig_103 A58_contig_103_1116 1220265 1221290 - SpoVAD
TC A58_contig_103 A58_contig_103_1117 1221451 1221894 - 9.A.11.1.1
peptidase A58_contig_103 A58_contig_103_1118 1221979 1222911 + M15.UPB
pfam A58_contig_103 A58_contig_103_1119 1223065 1223625 + DUF4358
TC A58_contig_103 A58_contig_103_1120 1223732 1225150 + 2.A.50.2.1
Gene ID: A58_contig_103_1112
Type: TC
Location: 1214399 - 1215823 (-)
Gene ID: A58_contig_103_1113
Type: CAZyme
Location: 1216453 - 1218222 (+)
Gene ID: A58_contig_103_1114
Type: TC
Location: 1218290 - 1219642 (-)
Gene ID: A58_contig_103_1115
Type: pfam
Location: 1219912 - 1220268 (-)
Gene ID: A58_contig_103_1116
Type: pfam
Location: 1220265 - 1221290 (-)
Gene ID: A58_contig_103_1117
Type: TC
Location: 1221451 - 1221894 (-)
Gene ID: A58_contig_103_1118
Type: peptidase
Location: 1221979 - 1222911 (+)
Gene ID: A58_contig_103_1119
Type: pfam
Location: 1223065 - 1223625 (+)
Gene ID: A58_contig_103_1120
Type: TC
Location: 1223732 - 1225150 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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