Cluster: A58.bin_1_CGC17
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: A58.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_1112 | 1214399 | 1215823 | - | 2.A.25.1.9 |
| CAZyme | A58_contig_103 | A58_contig_103_1113 | 1216453 | 1218222 | + | GH2 |
| TC | A58_contig_103 | A58_contig_103_1114 | 1218290 | 1219642 | - | 2.A.37.3.3 |
| pfam | A58_contig_103 | A58_contig_103_1115 | 1219912 | 1220268 | - | SpoVAC_SpoVAEB |
| pfam | A58_contig_103 | A58_contig_103_1116 | 1220265 | 1221290 | - | SpoVAD |
| TC | A58_contig_103 | A58_contig_103_1117 | 1221451 | 1221894 | - | 9.A.11.1.1 |
| peptidase | A58_contig_103 | A58_contig_103_1118 | 1221979 | 1222911 | + | M15.UPB |
| pfam | A58_contig_103 | A58_contig_103_1119 | 1223065 | 1223625 | + | DUF4358 |
| TC | A58_contig_103 | A58_contig_103_1120 | 1223732 | 1225150 | + | 2.A.50.2.1 |
Gene ID: A58_contig_103_1112
Type: TC
Location: 1214399 - 1215823 (-)
Type: TC
Location: 1214399 - 1215823 (-)
Gene ID: A58_contig_103_1113
Type: CAZyme
Location: 1216453 - 1218222 (+)
Type: CAZyme
Location: 1216453 - 1218222 (+)
Gene ID: A58_contig_103_1114
Type: TC
Location: 1218290 - 1219642 (-)
Type: TC
Location: 1218290 - 1219642 (-)
Gene ID: A58_contig_103_1115
Type: pfam
Location: 1219912 - 1220268 (-)
Type: pfam
Location: 1219912 - 1220268 (-)
Gene ID: A58_contig_103_1116
Type: pfam
Location: 1220265 - 1221290 (-)
Type: pfam
Location: 1220265 - 1221290 (-)
Gene ID: A58_contig_103_1117
Type: TC
Location: 1221451 - 1221894 (-)
Type: TC
Location: 1221451 - 1221894 (-)
Gene ID: A58_contig_103_1118
Type: peptidase
Location: 1221979 - 1222911 (+)
Type: peptidase
Location: 1221979 - 1222911 (+)
Gene ID: A58_contig_103_1119
Type: pfam
Location: 1223065 - 1223625 (+)
Type: pfam
Location: 1223065 - 1223625 (+)
Gene ID: A58_contig_103_1120
Type: TC
Location: 1223732 - 1225150 (+)
Type: TC
Location: 1223732 - 1225150 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.