Cluster: A58.bin_1_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: A58.bin_1
- CGC Family ID: CGCFAM_00718
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_1069 | 1164525 | 1165919 | - | 3.A.2.1.5 |
| TC | A58_contig_103 | A58_contig_103_1070 | 1165979 | 1166830 | - | 3.A.2.1.5 |
| TC | A58_contig_103 | A58_contig_103_1071 | 1166849 | 1168489 | - | 3.A.2.1.5 |
| pfam | A58_contig_103 | A58_contig_103_1072 | 1168428 | 1168967 | - | OSCP |
| pfam | A58_contig_103 | A58_contig_103_1073 | 1168964 | 1169470 | - | ATP-synt_B |
| TC | A58_contig_103 | A58_contig_103_1074 | 1169512 | 1169793 | - | 3.A.2.1.5 |
| TC | A58_contig_103 | A58_contig_103_1075 | 1169841 | 1170584 | - | 3.A.2.1.5 |
| pfam | A58_contig_103 | A58_contig_103_1076 | 1170588 | 1171085 | - | ATP-synt_I |
| pfam | A58_contig_103 | A58_contig_103_1077 | 1171218 | 1171478 | - | ATPase_gene1 |
| CAZyme | A58_contig_103 | A58_contig_103_1078 | 1171864 | 1173282 | - | GT5 |
| pfam | A58_contig_103 | A58_contig_103_1079 | 1173432 | 1174559 | - | NTP_transferase | Hexapep_GlmU |
| pfam | A58_contig_103 | A58_contig_103_1080 | 1174553 | 1175746 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | A58_contig_103 | A58_contig_103_1081 | 1175826 | 1177997 | - | CBM48 | GH13_9 |
Gene ID: A58_contig_103_1069
Type: TC
Location: 1164525 - 1165919 (-)
Type: TC
Location: 1164525 - 1165919 (-)
Gene ID: A58_contig_103_1070
Type: TC
Location: 1165979 - 1166830 (-)
Type: TC
Location: 1165979 - 1166830 (-)
Gene ID: A58_contig_103_1071
Type: TC
Location: 1166849 - 1168489 (-)
Type: TC
Location: 1166849 - 1168489 (-)
Gene ID: A58_contig_103_1072
Type: pfam
Location: 1168428 - 1168967 (-)
Type: pfam
Location: 1168428 - 1168967 (-)
Gene ID: A58_contig_103_1073
Type: pfam
Location: 1168964 - 1169470 (-)
Type: pfam
Location: 1168964 - 1169470 (-)
Gene ID: A58_contig_103_1074
Type: TC
Location: 1169512 - 1169793 (-)
Type: TC
Location: 1169512 - 1169793 (-)
Gene ID: A58_contig_103_1075
Type: TC
Location: 1169841 - 1170584 (-)
Type: TC
Location: 1169841 - 1170584 (-)
Gene ID: A58_contig_103_1076
Type: pfam
Location: 1170588 - 1171085 (-)
Type: pfam
Location: 1170588 - 1171085 (-)
Gene ID: A58_contig_103_1077
Type: pfam
Location: 1171218 - 1171478 (-)
Type: pfam
Location: 1171218 - 1171478 (-)
Gene ID: A58_contig_103_1078
Type: CAZyme
Location: 1171864 - 1173282 (-)
Type: CAZyme
Location: 1171864 - 1173282 (-)
Gene ID: A58_contig_103_1079
Type: pfam
Location: 1173432 - 1174559 (-)
Type: pfam
Location: 1173432 - 1174559 (-)
Gene ID: A58_contig_103_1080
Type: pfam
Location: 1174553 - 1175746 (-)
Type: pfam
Location: 1174553 - 1175746 (-)
Gene ID: A58_contig_103_1081
Type: CAZyme
Location: 1175826 - 1177997 (-)
Type: CAZyme
Location: 1175826 - 1177997 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.