Cluster: A58.bin_1_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A58.bin_1
- CGC Family ID: CGCFAM_00041
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_935 | 1034435 | 1035817 | + | 3.A.1.1.11 |
| TC | A58_contig_103 | A58_contig_103_936 | 1036012 | 1036938 | + | 3.A.1.1.11 |
| TC | A58_contig_103 | A58_contig_103_937 | 1036950 | 1037807 | + | 3.A.1.1.11 |
| TF | A58_contig_103 | A58_contig_103_938 | 1037911 | 1038747 | - | HTH_AraC | HTH_AraC |
| CAZyme | A58_contig_103 | A58_contig_103_939 | 1038856 | 1040412 | + | GH28 |
| CAZyme | A58_contig_103 | A58_contig_103_940 | 1040417 | 1041562 | + | GH105 |
Gene ID: A58_contig_103_935
Type: TC
Location: 1034435 - 1035817 (+)
Type: TC
Location: 1034435 - 1035817 (+)
Gene ID: A58_contig_103_936
Type: TC
Location: 1036012 - 1036938 (+)
Type: TC
Location: 1036012 - 1036938 (+)
Gene ID: A58_contig_103_937
Type: TC
Location: 1036950 - 1037807 (+)
Type: TC
Location: 1036950 - 1037807 (+)
Gene ID: A58_contig_103_938
Type: TF
Location: 1037911 - 1038747 (-)
Type: TF
Location: 1037911 - 1038747 (-)
Gene ID: A58_contig_103_939
Type: CAZyme
Location: 1038856 - 1040412 (+)
Type: CAZyme
Location: 1038856 - 1040412 (+)
Gene ID: A58_contig_103_940
Type: CAZyme
Location: 1040417 - 1041562 (+)
Type: CAZyme
Location: 1040417 - 1041562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.