Cluster: A58.bin_1_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A58.bin_1
- CGC Family ID: CGCFAM_00245
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A58_contig_103 | A58_contig_103_736 | 794648 | 795457 | - | 3.A.1.34.1 |
| TC | A58_contig_103 | A58_contig_103_737 | 795460 | 796386 | - | 3.A.1.34.1 |
| pfam | A58_contig_103 | A58_contig_103_738 | 796430 | 797479 | - | ABC_sub_bind | TAT_signal |
| CAZyme | A58_contig_103 | A58_contig_103_739 | 798007 | 798792 | - | GT2 |
| CAZyme | A58_contig_103 | A58_contig_103_740 | 798808 | 801234 | - | GT2 | GT2 |
Gene ID: A58_contig_103_736
Type: TC
Location: 794648 - 795457 (-)
Type: TC
Location: 794648 - 795457 (-)
Gene ID: A58_contig_103_737
Type: TC
Location: 795460 - 796386 (-)
Type: TC
Location: 795460 - 796386 (-)
Gene ID: A58_contig_103_738
Type: pfam
Location: 796430 - 797479 (-)
Type: pfam
Location: 796430 - 797479 (-)
Gene ID: A58_contig_103_739
Type: CAZyme
Location: 798007 - 798792 (-)
Type: CAZyme
Location: 798007 - 798792 (-)
Gene ID: A58_contig_103_740
Type: CAZyme
Location: 798808 - 801234 (-)
Type: CAZyme
Location: 798808 - 801234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900540455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.