dbCAN Logo

Cluster: A49.bin_10_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A49_contig_1848 A49_contig_1848_14 18314 19246 - 3.A.1.105.7
TF A49_contig_1848 A49_contig_1848_15 19430 19801 - GntR
pfam A49_contig_1848 A49_contig_1848_16 20607 21440 - PRD | PRD | CAT_RBD
TC A49_contig_1848 A49_contig_1848_17 21461 23617 - 4.A.1.1.14
TC A49_contig_1848 A49_contig_1848_18 23940 25784 - 3.A.1.120.6
pfam A49_contig_1848 A49_contig_1848_19 25891 26388 - PNPOx_N | FMN_bind_2 | Pyridox_ox_2
TC A49_contig_1848 A49_contig_1848_20 26712 27944 - 2.A.49.9.4
pfam A49_contig_1848 A49_contig_1848_21 28506 29804 - Enolase_C | Enolase_N | MR_MLE_C
TC A49_contig_1848 A49_contig_1848_22 30765 31379 - 9.B.28.1.2
TF A49_contig_1848 A49_contig_1848_23 31513 32541 - LacI
CAZyme A49_contig_1848 A49_contig_1848_24 32663 34153 - GH77
TC A49_contig_1848 A49_contig_1848_25 34174 35100 - 3.A.1.1.45
TC A49_contig_1848 A49_contig_1848_26 35100 36026 - 3.A.1.1.45
TC A49_contig_1848 A49_contig_1848_27 36164 37459 - 3.A.1.1.45
CAZyme A49_contig_1848 A49_contig_1848_28 37948 40206 - GT35
TF A49_contig_1848 A49_contig_1848_29 40337 41218 + HTH_AraC | HTH_AraC
CAZyme A49_contig_1848 A49_contig_1848_30 41467 43140 + GH13_31
Gene ID: A49_contig_1848_14
Type: TC
Location: 18314 - 19246 (-)
Gene ID: A49_contig_1848_15
Type: TF
Location: 19430 - 19801 (-)
Gene ID: A49_contig_1848_16
Type: pfam
Location: 20607 - 21440 (-)
Gene ID: A49_contig_1848_17
Type: TC
Location: 21461 - 23617 (-)
Gene ID: A49_contig_1848_18
Type: TC
Location: 23940 - 25784 (-)
Gene ID: A49_contig_1848_19
Type: pfam
Location: 25891 - 26388 (-)
Gene ID: A49_contig_1848_20
Type: TC
Location: 26712 - 27944 (-)
Gene ID: A49_contig_1848_21
Type: pfam
Location: 28506 - 29804 (-)
Gene ID: A49_contig_1848_22
Type: TC
Location: 30765 - 31379 (-)
Gene ID: A49_contig_1848_23
Type: TF
Location: 31513 - 32541 (-)
Gene ID: A49_contig_1848_24
Type: CAZyme
Location: 32663 - 34153 (-)
Gene ID: A49_contig_1848_25
Type: TC
Location: 34174 - 35100 (-)
Gene ID: A49_contig_1848_26
Type: TC
Location: 35100 - 36026 (-)
Gene ID: A49_contig_1848_27
Type: TC
Location: 36164 - 37459 (-)
Gene ID: A49_contig_1848_28
Type: CAZyme
Location: 37948 - 40206 (-)
Gene ID: A49_contig_1848_29
Type: TF
Location: 40337 - 41218 (+)
Gene ID: A49_contig_1848_30
Type: CAZyme
Location: 41467 - 43140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A49_contig_1848_25 vegan > omnivore 2.78601 0.01560
A49_contig_1848_26 vegan > omnivore 1.97934 0.01560
A49_contig_1848_28 vegan > omnivore 1.00856 0.01560

🧭 Explore Read Mapping of CGC

← Back to Cluster List