Cluster: A46.bin_5_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_04428
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_840 | A46_contig_840_286 | 326259 | 327326 | + | GT2 |
| CAZyme | A46_contig_840 | A46_contig_840_287 | 327334 | 328203 | + | GT11 |
| CAZyme | A46_contig_840 | A46_contig_840_288 | 328215 | 329240 | + | GT11 |
| pfam | A46_contig_840 | A46_contig_840_289 | 329298 | 330791 | + | DUF6056 |
| CAZyme | A46_contig_840 | A46_contig_840_290 | 330802 | 331680 | + | GT17 |
| CAZyme | A46_contig_840 | A46_contig_840_291 | 331859 | 332770 | + | GT2 |
| TC | A46_contig_840 | A46_contig_840_292 | 332823 | 334583 | + | 3.A.1.106.15 |
Gene ID: A46_contig_840_286
Type: CAZyme
Location: 326259 - 327326 (+)
Type: CAZyme
Location: 326259 - 327326 (+)
Gene ID: A46_contig_840_287
Type: CAZyme
Location: 327334 - 328203 (+)
Type: CAZyme
Location: 327334 - 328203 (+)
Gene ID: A46_contig_840_288
Type: CAZyme
Location: 328215 - 329240 (+)
Type: CAZyme
Location: 328215 - 329240 (+)
Gene ID: A46_contig_840_289
Type: pfam
Location: 329298 - 330791 (+)
Type: pfam
Location: 329298 - 330791 (+)
Gene ID: A46_contig_840_290
Type: CAZyme
Location: 330802 - 331680 (+)
Type: CAZyme
Location: 330802 - 331680 (+)
Gene ID: A46_contig_840_291
Type: CAZyme
Location: 331859 - 332770 (+)
Type: CAZyme
Location: 331859 - 332770 (+)
Gene ID: A46_contig_840_292
Type: TC
Location: 332823 - 334583 (+)
Type: TC
Location: 332823 - 334583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.